Variant report
| Variant | rs11169662 |
|---|---|
| Chromosome Location | chr12:51401706-51401707 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:51378000-51401800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 2 | chr12:51380200-51401800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 3 | chr12:51380200-51402200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 4 | chr12:51381200-51402200 | Strong transcription | Fetal Thymus | thymus |
| 5 | chr12:51381200-51402200 | Weak transcription | Psoas Muscle | Psoas |
| 6 | chr12:51381200-51402400 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 7 | chr12:51381200-51403000 | Strong transcription | Fetal Muscle Leg | muscle |
| 8 | chr12:51381400-51403000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 9 | chr12:51381800-51402400 | Strong transcription | Liver | Liver |
| 10 | chr12:51382000-51402000 | Strong transcription | Fetal Stomach | stomach |
| 11 | chr12:51382000-51402200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 12 | chr12:51385600-51402600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 13 | chr12:51386000-51406600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 14 | chr12:51386000-51414200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 15 | chr12:51386800-51402200 | Weak transcription | Right Atrium | heart |
| 16 | chr12:51388200-51402000 | Strong transcription | Adipose Nuclei | Adipose |
| 17 | chr12:51388600-51406600 | Weak transcription | Small Intestine | intestine |
| 18 | chr12:51389400-51405400 | Weak transcription | Esophagus | oesophagus |
| 19 | chr12:51390000-51405800 | Weak transcription | Stomach Mucosa | stomach |
| 20 | chr12:51390800-51402800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 21 | chr12:51391000-51402200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr12:51392400-51401800 | Strong transcription | Thymus | Thymus |
| 23 | chr12:51392600-51402400 | Strong transcription | Duodenum Mucosa | Duodenum |
| 24 | chr12:51393000-51402000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 25 | chr12:51393400-51402000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 26 | chr12:51394400-51402400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 27 | chr12:51394400-51403600 | Weak transcription | Ovary | ovary |
| 28 | chr12:51395200-51402400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 29 | chr12:51395400-51402600 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr12:51396000-51402200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 31 | chr12:51396000-51402400 | Strong transcription | Left Ventricle | heart |
| 32 | chr12:51396800-51402400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr12:51397400-51403000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 34 | chr12:51397600-51401800 | Genic enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr12:51397600-51402000 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 36 | chr12:51397600-51402200 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr12:51397600-51402400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 38 | chr12:51397800-51402200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 39 | chr12:51397800-51402400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 40 | chr12:51398000-51402200 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 41 | chr12:51398000-51402400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 42 | chr12:51398000-51402400 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 43 | chr12:51398000-51402400 | Strong transcription | Dnd41 | blood |
| 44 | chr12:51398200-51401800 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 45 | chr12:51398200-51402000 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 46 | chr12:51398200-51402000 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 47 | chr12:51398200-51402400 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 48 | chr12:51398200-51402400 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 49 | chr12:51398200-51402600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 50 | chr12:51398400-51402400 | Strong transcription | Fetal Lung | lung |
