Variant report
| Variant | rs11171935 |
|---|---|
| Chromosome Location | chr12:57079515-57079516 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:57065200-57079800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr12:57073000-57080200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 3 | chr12:57074800-57079600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 4 | chr12:57074800-57079600 | Weak transcription | Esophagus | oesophagus |
| 5 | chr12:57077000-57080400 | Active TSS | HepG2 | liver |
| 6 | chr12:57077000-57081000 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 7 | chr12:57077000-57083800 | Active TSS | GM12878-XiMat | blood |
| 8 | chr12:57077200-57079600 | Weak transcription | Spleen | Spleen |
| 9 | chr12:57077200-57083400 | Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 10 | chr12:57077400-57080200 | Weak transcription | Lung | lung |
| 11 | chr12:57077400-57083200 | Active TSS | Colonic Mucosa | Colon |
| 12 | chr12:57077800-57079600 | Genic enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 13 | chr12:57077800-57079600 | Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 14 | chr12:57077800-57079800 | Active TSS | NHDF-Ad | bronchial |
| 15 | chr12:57077800-57080600 | Enhancers | Fetal Brain Male | brain |
| 16 | chr12:57077800-57081200 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 17 | chr12:57077800-57081600 | Transcr. at gene 5' and 3' | Dnd41 | blood |
| 18 | chr12:57077800-57081800 | Active TSS | Right Atrium | heart |
| 19 | chr12:57077800-57082400 | Active TSS | Rectal Smooth Muscle | rectum |
| 20 | chr12:57077800-57082600 | Active TSS | NHLF | lung |
| 21 | chr12:57077800-57083000 | Active TSS | Psoas Muscle | Psoas |
| 22 | chr12:57077800-57083200 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 23 | chr12:57077800-57083200 | Active TSS | Ovary | ovary |
| 24 | chr12:57077800-57083200 | Active TSS | Right Ventricle | heart |
| 25 | chr12:57078000-57080200 | Transcr. at gene 5' and 3' | HUES48 Cell Line | embryonic stem cell |
| 26 | chr12:57078000-57082600 | Active TSS | Fetal Kidney | kidney |
| 27 | chr12:57078200-57082400 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 28 | chr12:57078200-57083000 | Active TSS | HSMM | muscle |
| 29 | chr12:57078400-57080600 | Transcr. at gene 5' and 3' | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr12:57078400-57080600 | Flanking Active TSS | Primary T cells fromperipheralblood | blood |
| 31 | chr12:57078400-57080600 | Transcr. at gene 5' and 3' | Fetal Thymus | thymus |
| 32 | chr12:57078400-57083400 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 33 | chr12:57078600-57079600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 34 | chr12:57078600-57079600 | Enhancers | Fetal Stomach | stomach |
| 35 | chr12:57078600-57080200 | Flanking Active TSS | Fetal Adrenal Gland | Adrenal Gland |
| 36 | chr12:57078600-57082400 | Active TSS | Pancreas | Pancrea |
| 37 | chr12:57078600-57082400 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 38 | chr12:57078600-57083000 | Active TSS | HMEC | breast |
| 39 | chr12:57078600-57083800 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 40 | chr12:57078800-57079600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 41 | chr12:57078800-57079800 | Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr12:57078800-57079800 | Active TSS | Brain Angular Gyrus | brain |
| 43 | chr12:57078800-57079800 | Enhancers | Brain Cingulate Gyrus | brain |
| 44 | chr12:57078800-57079800 | Weak transcription | Stomach Mucosa | stomach |
| 45 | chr12:57078800-57079800 | Active TSS | K562 | blood |
| 46 | chr12:57078800-57080000 | Transcr. at gene 5' and 3' | NHEK | skin |
| 47 | chr12:57078800-57080200 | Weak transcription | HSMMtube | muscle |
| 48 | chr12:57078800-57080600 | Transcr. at gene 5' and 3' | Fetal Intestine Small | intestine |
| 49 | chr12:57078800-57080800 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 50 | chr12:57078800-57081200 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
