Variant report
| Variant | rs11172197 |
|---|---|
| Chromosome Location | chr12:57790425-57790426 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:57695200-57794600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 2 | chr12:57731600-57796000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 3 | chr12:57736400-57795000 | Weak transcription | Right Ventricle | heart |
| 4 | chr12:57753200-57823800 | Weak transcription | Esophagus | oesophagus |
| 5 | chr12:57762800-57811800 | Weak transcription | Pancreas | Pancrea |
| 6 | chr12:57763000-57796800 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr12:57763000-57799200 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr12:57763000-57800400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 9 | chr12:57766200-57795000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 10 | chr12:57766200-57816000 | Weak transcription | Fetal Lung | lung |
| 11 | chr12:57768600-57790800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 12 | chr12:57770800-57824000 | Weak transcription | Gastric | stomach |
| 13 | chr12:57774400-57819200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr12:57780400-57791400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 15 | chr12:57780400-57795000 | Weak transcription | Brain Substantia Nigra | brain |
| 16 | chr12:57780600-57795000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 17 | chr12:57780800-57823200 | Weak transcription | Spleen | Spleen |
| 18 | chr12:57781200-57795000 | Weak transcription | Aorta | Aorta |
| 19 | chr12:57783400-57792800 | Weak transcription | K562 | blood |
| 20 | chr12:57783400-57794600 | Weak transcription | Colon Smooth Muscle | Colon |
| 21 | chr12:57783600-57797600 | Weak transcription | Hela-S3 | cervix |
| 22 | chr12:57783600-57805000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 23 | chr12:57783800-57799200 | Weak transcription | Primary B cells from cord blood | blood |
| 24 | chr12:57783800-57800200 | Weak transcription | HSMMtube | muscle |
| 25 | chr12:57783800-57808600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 26 | chr12:57783800-57809000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 27 | chr12:57783800-57823200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 28 | chr12:57784000-57791400 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 29 | chr12:57784200-57791200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 30 | chr12:57784200-57794600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 31 | chr12:57784200-57794600 | Weak transcription | Fetal Heart | heart |
| 32 | chr12:57784200-57795000 | Weak transcription | Brain Anterior Caudate | brain |
| 33 | chr12:57784200-57809800 | Weak transcription | Osteobl | bone |
| 34 | chr12:57784200-57818000 | Weak transcription | HSMM | muscle |
| 35 | chr12:57784400-57794600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr12:57784400-57794600 | Weak transcription | HMEC | breast |
| 37 | chr12:57784400-57794800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 38 | chr12:57784400-57794800 | Weak transcription | Brain Angular Gyrus | brain |
| 39 | chr12:57784400-57795000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 40 | chr12:57784400-57808800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 41 | chr12:57784400-57813600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 42 | chr12:57784400-57816400 | Weak transcription | NHLF | lung |
| 43 | chr12:57784600-57795000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 44 | chr12:57785600-57792000 | Strong transcription | Fetal Intestine Small | intestine |
| 45 | chr12:57786000-57791000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr12:57786400-57794400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr12:57786400-57794400 | Weak transcription | NHEK | skin |
| 48 | chr12:57786400-57797400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 49 | chr12:57786400-57815600 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr12:57786600-57805600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
