Variant report
| Variant | rs11172804 |
|---|---|
| Chromosome Location | chr12:59290124-59290125 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59262600-59295000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr12:59266000-59311000 | Weak transcription | Fetal Thymus | thymus |
| 3 | chr12:59275000-59300800 | Weak transcription | HSMMtube | muscle |
| 4 | chr12:59275200-59297800 | Weak transcription | Hela-S3 | cervix |
| 5 | chr12:59279000-59310800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 6 | chr12:59279200-59290200 | Weak transcription | Fetal Heart | heart |
| 7 | chr12:59279200-59309400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 8 | chr12:59282400-59290200 | Weak transcription | Fetal Brain Female | brain |
| 9 | chr12:59282400-59290600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 10 | chr12:59282400-59297800 | Weak transcription | A549 | lung |
| 11 | chr12:59283400-59298000 | Weak transcription | Fetal Brain Male | brain |
| 12 | chr12:59283800-59300400 | Weak transcription | Placenta | Placenta |
| 13 | chr12:59284000-59294800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 14 | chr12:59284000-59297800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr12:59284000-59297800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr12:59284000-59298000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 17 | chr12:59284000-59298000 | Weak transcription | HSMM | muscle |
| 18 | chr12:59284000-59300800 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr12:59284000-59300800 | Weak transcription | HepG2 | liver |
| 20 | chr12:59284200-59290200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr12:59284200-59297800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 22 | chr12:59284200-59297800 | Weak transcription | Liver | Liver |
| 23 | chr12:59284200-59304600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 24 | chr12:59284600-59298000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 25 | chr12:59285000-59290400 | Enhancers | Brain Cingulate Gyrus | brain |
| 26 | chr12:59285600-59292400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 27 | chr12:59286000-59292600 | Enhancers | NHEK | skin |
| 28 | chr12:59286400-59291000 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 29 | chr12:59286600-59292000 | Enhancers | Colon Smooth Muscle | Colon |
| 30 | chr12:59286800-59290800 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr12:59286800-59298000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 32 | chr12:59287600-59297800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 33 | chr12:59287800-59290800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 34 | chr12:59287800-59291600 | Weak transcription | Small Intestine | intestine |
| 35 | chr12:59287800-59297800 | Weak transcription | NH-A | brain |
| 36 | chr12:59287800-59298000 | Weak transcription | Brain Angular Gyrus | brain |
| 37 | chr12:59287800-59301800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 38 | chr12:59288000-59290600 | Enhancers | Brain Anterior Caudate | brain |
| 39 | chr12:59288000-59290600 | Enhancers | Brain Substantia Nigra | brain |
| 40 | chr12:59288000-59293400 | Weak transcription | NHDF-Ad | bronchial |
| 41 | chr12:59288000-59297800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 42 | chr12:59288000-59297800 | Weak transcription | Osteobl | bone |
| 43 | chr12:59288200-59290200 | Weak transcription | Fetal Kidney | kidney |
| 44 | chr12:59288200-59290600 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 45 | chr12:59288200-59290600 | Enhancers | Brain Hippocampus Middle | brain |
| 46 | chr12:59288200-59298000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 47 | chr12:59288200-59298600 | Weak transcription | NHLF | lung |
| 48 | chr12:59288600-59290400 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 49 | chr12:59288600-59293000 | Enhancers | Ovary | ovary |
| 50 | chr12:59288600-59295200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
