Variant report
| Variant | rs12146851 |
|---|---|
| Chromosome Location | chr12:59280992-59280993 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:59260600-59284200 | Strong transcription | HUVEC | blood vessel |
| 2 | chr12:59261400-59284200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 3 | chr12:59261600-59284200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 4 | chr12:59262600-59295000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 5 | chr12:59263400-59281400 | Strong transcription | NHEK | skin |
| 6 | chr12:59264800-59284200 | Strong transcription | Duodenum Mucosa | Duodenum |
| 7 | chr12:59265400-59284200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 8 | chr12:59266000-59282000 | Strong transcription | Adipose Nuclei | Adipose |
| 9 | chr12:59266000-59311000 | Weak transcription | Fetal Thymus | thymus |
| 10 | chr12:59266200-59284000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 11 | chr12:59266400-59284000 | Strong transcription | Fetal Muscle Leg | muscle |
| 12 | chr12:59267800-59281600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr12:59271600-59281400 | Strong transcription | HMEC | breast |
| 14 | chr12:59271600-59282000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 15 | chr12:59271600-59282000 | Strong transcription | NHDF-Ad | bronchial |
| 16 | chr12:59271600-59284600 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 17 | chr12:59271600-59284600 | Strong transcription | Osteobl | bone |
| 18 | chr12:59271800-59281400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 19 | chr12:59271800-59284000 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 20 | chr12:59272000-59282000 | Strong transcription | NHLF | lung |
| 21 | chr12:59272200-59281400 | Strong transcription | NH-A | brain |
| 22 | chr12:59272800-59285800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 23 | chr12:59273000-59281400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr12:59273200-59283400 | Weak transcription | Esophagus | oesophagus |
| 25 | chr12:59273400-59281200 | Weak transcription | Brain Hippocampus Middle | brain |
| 26 | chr12:59273600-59287000 | Weak transcription | Stomach Mucosa | stomach |
| 27 | chr12:59273800-59283400 | Weak transcription | Lung | lung |
| 28 | chr12:59273800-59283400 | Weak transcription | Spleen | Spleen |
| 29 | chr12:59273800-59289000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 30 | chr12:59274600-59281000 | Weak transcription | HepG2 | liver |
| 31 | chr12:59274600-59281200 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr12:59274600-59281400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr12:59274600-59281400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 34 | chr12:59274600-59283200 | Weak transcription | Gastric | stomach |
| 35 | chr12:59274600-59283200 | Weak transcription | Pancreas | Pancrea |
| 36 | chr12:59274800-59283600 | Weak transcription | Fetal Intestine Small | intestine |
| 37 | chr12:59274800-59289000 | Weak transcription | Right Ventricle | heart |
| 38 | chr12:59275000-59300800 | Weak transcription | HSMMtube | muscle |
| 39 | chr12:59275200-59297800 | Weak transcription | Hela-S3 | cervix |
| 40 | chr12:59276600-59284000 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 41 | chr12:59277000-59281000 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 42 | chr12:59277000-59282000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 43 | chr12:59277200-59282000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 44 | chr12:59277400-59281600 | Weak transcription | Fetal Brain Female | brain |
| 45 | chr12:59277400-59286000 | Weak transcription | GM12878-XiMat | blood |
| 46 | chr12:59277600-59282000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 47 | chr12:59277600-59283000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 48 | chr12:59277800-59288800 | Weak transcription | Right Atrium | heart |
| 49 | chr12:59278000-59282400 | Strong transcription | A549 | lung |
| 50 | chr12:59278200-59281000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
