Variant report

Variant	rs11174377
Chromosome Location	chr12:62611912-62611913
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10784287	0.87[ASN][1000 genomes]
rs10877817	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11174360	0.86[ASN][1000 genomes]
rs11174361	0.83[ASN][1000 genomes]
rs11174368	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11174369	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11174373	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11174378	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11174383	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11174387	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12823493	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1406799	0.87[ASN][1000 genomes]
rs1920087	0.87[ASN][1000 genomes]
rs2884779	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3759290	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4143667	0.87[ASN][1000 genomes]
rs7305482	0.88[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7308544	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62602200-62614200	Weak transcription	Psoas Muscle	Psoas
2	chr12:62604200-62612400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr12:62609200-62612000	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr12:62609200-62620600	Weak transcription	K562	blood
5	chr12:62609800-62612400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
6	chr12:62611400-62612200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr12:62611600-62613400	Weak transcription	Primary T cells from cord blood	blood
8	chr12:62611600-62613400	Weak transcription	Monocytes-CD14+_RO01746	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links