The 2.0 version of rSNPBase

Variant report

Variant rs11174410
Chromosome Location chr12:62671564-62671565
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62655400-62685600 Weak transcription HSMM muscle
2 chr12:62656400-62679400 Weak transcription Brain Anterior Caudate brain
3 chr12:62656600-62685600 Weak transcription Aorta Aorta
4 chr12:62656600-62685600 Weak transcription Pancreas Pancrea
5 chr12:62656800-62675400 Weak transcription Brain Hippocampus Middle brain
6 chr12:62659000-62671800 Enhancers Primary T helper cells fromperipheralblood blood
7 chr12:62661400-62673600 Weak transcription Brain Cingulate Gyrus brain
8 chr12:62661600-62676000 Weak transcription Fetal Thymus thymus
9 chr12:62661600-62682800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr12:62662200-62676000 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr12:62663000-62685600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr12:62663200-62671600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr12:62663200-62684800 Weak transcription NHEK skin
14 chr12:62663400-62685600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr12:62664400-62673000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr12:62664400-62685400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr12:62664800-62671600 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr12:62664800-62676200 Weak transcription Hela-S3 cervix
19 chr12:62665000-62688000 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr12:62665600-62674400 Weak transcription Brain Substantia Nigra brain
21 chr12:62665600-62674400 Weak transcription Dnd41 blood
22 chr12:62665600-62675600 Weak transcription Primary B cells from cord blood blood
23 chr12:62665800-62679000 Weak transcription Fetal Lung lung
24 chr12:62666800-62678200 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr12:62666800-62681600 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr12:62667200-62671600 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr12:62667200-62677000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr12:62667200-62682200 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr12:62667800-62672000 Enhancers Primary hematopoietic stem cells blood
30 chr12:62667800-62676400 Weak transcription A549 lung
31 chr12:62667800-62689000 Weak transcription HSMMtube muscle
32 chr12:62668400-62674200 Weak transcription Psoas Muscle Psoas
33 chr12:62668400-62675200 Weak transcription Primary T cells fromperipheralblood blood
34 chr12:62668400-62675200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr12:62668400-62675200 Weak transcription Left Ventricle heart
36 chr12:62668400-62679200 Weak transcription Fetal Brain Male brain
37 chr12:62668400-62682000 Weak transcription NHLF lung
38 chr12:62668800-62672200 Weak transcription Fetal Brain Female brain
39 chr12:62668800-62674400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr12:62668800-62678000 Enhancers Primary T helper cells PMA-I stimulated --
41 chr12:62669200-62672400 ZNF genes & repeats GM12878-XiMat blood
42 chr12:62669200-62677200 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr12:62669600-62673400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr12:62669600-62674200 Weak transcription Primary B cells from peripheral blood blood
45 chr12:62669600-62674200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr12:62669600-62675600 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr12:62669600-62680400 Weak transcription Right Ventricle heart
48 chr12:62669800-62671800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr12:62669800-62673400 Weak transcription Small Intestine intestine
50 chr12:62669800-62675800 Weak transcription Ovary ovary

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Last update: Aug 31, 2015