The 2.0 version of rSNPBase

Variant report

Variant rs7298827
Chromosome Location chr12:62659710-62659711
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:62654800-62660600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr12:62655000-62663400 Weak transcription Lung lung
3 chr12:62655400-62660800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr12:62655400-62685600 Weak transcription HSMM muscle
5 chr12:62655600-62661400 Weak transcription NH-A brain
6 chr12:62655800-62661200 Weak transcription Osteobl bone
7 chr12:62656000-62660800 Weak transcription Brain Cingulate Gyrus brain
8 chr12:62656000-62661000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr12:62656000-62661200 Weak transcription Muscle Satellite Cultured Cells --
10 chr12:62656000-62661400 Weak transcription Stomach Mucosa stomach
11 chr12:62656000-62662000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr12:62656000-62663200 Weak transcription Placenta Placenta
13 chr12:62656000-62664800 Weak transcription Fetal Stomach stomach
14 chr12:62656000-62665400 Weak transcription Brain Angular Gyrus brain
15 chr12:62656000-62668200 Weak transcription Right Atrium heart
16 chr12:62656200-62659800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
17 chr12:62656200-62661000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr12:62656200-62661200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr12:62656400-62661200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr12:62656400-62669600 Enhancers Liver Liver
21 chr12:62656400-62679400 Weak transcription Brain Anterior Caudate brain
22 chr12:62656600-62660800 Weak transcription NHLF lung
23 chr12:62656600-62661000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr12:62656600-62661000 Weak transcription Rectal Smooth Muscle rectum
25 chr12:62656600-62661400 Weak transcription HMEC breast
26 chr12:62656600-62661400 Weak transcription HUVEC blood vessel
27 chr12:62656600-62662200 Weak transcription Adipose Nuclei Adipose
28 chr12:62656600-62663200 Weak transcription Ovary ovary
29 chr12:62656600-62664000 Enhancers Primary neutrophils fromperipheralblood blood
30 chr12:62656600-62668400 Weak transcription Fetal Brain Female brain
31 chr12:62656600-62685600 Weak transcription Aorta Aorta
32 chr12:62656600-62685600 Weak transcription Pancreas Pancrea
33 chr12:62656800-62675400 Weak transcription Brain Hippocampus Middle brain
34 chr12:62657400-62661000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr12:62657400-62666600 Weak transcription HepG2 liver
36 chr12:62657600-62660200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr12:62657800-62659800 Enhancers Primary B cells from peripheral blood blood
38 chr12:62657800-62661000 Weak transcription A549 lung
39 chr12:62658000-62661000 Weak transcription Fetal Intestine Large intestine
40 chr12:62658000-62663200 Weak transcription Thymus Thymus
41 chr12:62658200-62661000 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr12:62658200-62661000 Weak transcription Fetal Thymus thymus
43 chr12:62658200-62661200 Weak transcription Colon Smooth Muscle Colon
44 chr12:62658200-62661200 Weak transcription Fetal Intestine Small intestine
45 chr12:62658200-62661200 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr12:62658200-62661400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr12:62658400-62669400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr12:62658400-62671200 Enhancers Primary T killer naive cells fromperipheralblood blood
49 chr12:62658400-62671400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr12:62658600-62659800 Flanking Active TSS Primary T cells from cord blood blood

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Last update: Aug 31, 2015