Variant report

Variant rs1117832
Chromosome Location chr9:140585778-140585779
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140564000-140591200 Weak transcription Aorta Aorta
2 chr9:140564200-140599400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr9:140568200-140586000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr9:140569600-140589600 Weak transcription Stomach Smooth Muscle stomach
5 chr9:140569600-140594600 Weak transcription NHEK skin
6 chr9:140571800-140586000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr9:140573000-140638400 Weak transcription Small Intestine intestine
8 chr9:140574000-140592400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr9:140574200-140595400 Weak transcription Dnd41 blood
10 chr9:140575000-140597000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr9:140575400-140586000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr9:140575600-140585800 Weak transcription Fetal Thymus thymus
13 chr9:140575600-140589600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr9:140575600-140596800 Weak transcription Colonic Mucosa Colon
15 chr9:140575800-140586000 Weak transcription Stomach Mucosa stomach
16 chr9:140575800-140594200 Weak transcription HMEC breast
17 chr9:140575800-140596600 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr9:140576200-140599600 Weak transcription Fetal Kidney kidney
19 chr9:140576400-140586000 Weak transcription Duodenum Mucosa Duodenum
20 chr9:140577400-140589200 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr9:140577400-140592400 Weak transcription Fetal Intestine Large intestine
22 chr9:140577800-140586000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr9:140577800-140589400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr9:140578000-140586000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr9:140578000-140589600 Weak transcription H9 Cell Line embryonic stem cell
26 chr9:140578200-140589600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr9:140580600-140597000 Weak transcription NH-A brain
28 chr9:140581800-140586800 Enhancers Brain Substantia Nigra brain
29 chr9:140582200-140585800 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr9:140582200-140587600 Enhancers Primary T helper cells PMA-I stimulated --
31 chr9:140582600-140586400 Enhancers Brain Anterior Caudate brain
32 chr9:140582800-140586000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr9:140582800-140586000 Enhancers Monocytes-CD14+_RO01746 blood
34 chr9:140582800-140586200 Enhancers Fetal Brain Male brain
35 chr9:140582800-140586600 Enhancers Brain Inferior Temporal Lobe brain
36 chr9:140582800-140587000 Enhancers Brain Cingulate Gyrus brain
37 chr9:140582800-140587400 Enhancers Brain Hippocampus Middle brain
38 chr9:140582800-140587600 Enhancers Primary monocytes fromperipheralblood blood
39 chr9:140582800-140587600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr9:140583000-140586000 Enhancers Primary neutrophils fromperipheralblood blood
41 chr9:140583200-140586400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr9:140583200-140586600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr9:140583200-140587400 Enhancers Skeletal Muscle Male skeletal muscle
44 chr9:140583200-140587600 Enhancers Liver Liver
45 chr9:140583200-140588000 Enhancers Adipose Nuclei Adipose
46 chr9:140583200-140588600 Enhancers Spleen Spleen
47 chr9:140583400-140586000 Weak transcription Psoas Muscle Psoas
48 chr9:140583400-140586200 Weak transcription Fetal Muscle Trunk muscle
49 chr9:140583400-140586400 Enhancers Fetal Brain Female brain
50 chr9:140583400-140589200 Weak transcription NHLF lung

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