Variant report

Variant	rs11188306
Chromosome Location	chr10:97146712-97146713
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	PAX5	chr10:97146532-97146903	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97146581..97148830-chr10:97151387..97153337,2	K562	blood:
2	chr10:97140678..97143224-chr10:97145015..97146938,2	K562	blood:

Variant related genes	Relation type
SORBS1	TF binding region

rs_ID	r²[population]
rs1536556	0.84[AFR][1000 genomes]
rs2274490	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4918921	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97107200-97151800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:97109000-97148000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr10:97121000-97148000	Weak transcription	Esophagus	oesophagus
4	chr10:97122000-97149400	Weak transcription	Spleen	Spleen
5	chr10:97130200-97156600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr10:97135600-97155600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr10:97137200-97147400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:97137200-97148000	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr10:97137800-97147400	Strong transcription	HepG2	liver
10	chr10:97137800-97156000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr10:97138200-97147200	Strong transcription	Skeletal Muscle Male	skeletal muscle
12	chr10:97138400-97147000	Strong transcription	Skeletal Muscle Female	skeletal muscle
13	chr10:97138400-97147400	Weak transcription	Right Atrium	heart
14	chr10:97140000-97148200	Weak transcription	Fetal Heart	heart
15	chr10:97140600-97158600	Weak transcription	HSMM	muscle
16	chr10:97140800-97147000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr10:97140800-97147200	Weak transcription	Brain Angular Gyrus	brain
18	chr10:97140800-97148000	Weak transcription	Duodenum Mucosa	Duodenum
19	chr10:97140800-97152400	Weak transcription	Colonic Mucosa	Colon
20	chr10:97141000-97147800	Weak transcription	Fetal Brain Male	brain
21	chr10:97142200-97147400	Weak transcription	Gastric	stomach
22	chr10:97142200-97147400	Weak transcription	Rectal Mucosa Donor 31	rectum
23	chr10:97142200-97151800	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr10:97142200-97152400	Weak transcription	Fetal Muscle Trunk	muscle
25	chr10:97142400-97147600	Weak transcription	Brain Substantia Nigra	brain
26	chr10:97142400-97152400	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr10:97142600-97155600	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr10:97143000-97148800	Weak transcription	Brain Germinal Matrix	brain
29	chr10:97143000-97151400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr10:97143200-97147200	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr10:97143400-97147400	Weak transcription	Brain Anterior Caudate	brain
32	chr10:97143600-97147000	Genic enhancers	Adipose Nuclei	Adipose
33	chr10:97143600-97151000	Weak transcription	Fetal Lung	lung
34	chr10:97143600-97151400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr10:97144000-97151600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr10:97144000-97152400	Weak transcription	HUES6 Cell Line	embryonic stem cell
37	chr10:97144000-97152400	Weak transcription	Psoas Muscle	Psoas
38	chr10:97144000-97155400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr10:97144200-97149400	Weak transcription	HSMMtube	muscle
40	chr10:97144200-97151600	Weak transcription	HUES48 Cell Line	embryonic stem cell
41	chr10:97144400-97147400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
42	chr10:97144400-97147400	Strong transcription	Left Ventricle	heart
43	chr10:97144400-97148200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr10:97144400-97149400	Weak transcription	Aorta	Aorta
45	chr10:97144400-97152400	Weak transcription	Ovary	ovary
46	chr10:97144400-97154000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr10:97144400-97155600	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr10:97144600-97147400	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr10:97144600-97149600	Weak transcription	Lung	lung
50	chr10:97144800-97148000	Weak transcription	Rectal Smooth Muscle	rectum

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