The 2.0 version of rSNPBase

Variant report

Variant rs11196778
Chromosome Location chr10:116290569-116290570
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116286800-116291600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr10:116286800-116291800 Weak transcription Pancreas Pancrea
3 chr10:116286800-116294200 Weak transcription Placenta Placenta
4 chr10:116286800-116298000 Weak transcription Esophagus oesophagus
5 chr10:116287000-116291600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr10:116287000-116291600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr10:116287000-116291800 Weak transcription Fetal Muscle Trunk muscle
8 chr10:116287000-116292400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr10:116287000-116296600 Weak transcription HSMM muscle
10 chr10:116287000-116298200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr10:116287000-116298200 Weak transcription Lung lung
12 chr10:116287000-116301200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr10:116287200-116292000 Weak transcription HSMMtube muscle
14 chr10:116287200-116299400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr10:116287200-116299400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr10:116287200-116300600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr10:116287200-116301600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr10:116287200-116307200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr10:116287400-116290600 Weak transcription Spleen Spleen
20 chr10:116287400-116291600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr10:116287400-116291800 Weak transcription Adipose Nuclei Adipose
22 chr10:116287400-116293400 Weak transcription Primary hematopoietic stem cells blood
23 chr10:116287400-116294800 Weak transcription Fetal Kidney kidney
24 chr10:116287400-116296200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr10:116287400-116297200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr10:116287400-116297400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr10:116287400-116297400 Weak transcription Fetal Heart heart
28 chr10:116287400-116297600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr10:116287400-116297800 Weak transcription Duodenum Mucosa Duodenum
30 chr10:116287400-116298000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr10:116287400-116298000 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr10:116287400-116298200 Weak transcription HMEC breast
33 chr10:116287400-116300400 Weak transcription Brain Hippocampus Middle brain
34 chr10:116287400-116300600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr10:116287400-116300600 Weak transcription Colon Smooth Muscle Colon
36 chr10:116287400-116300800 Weak transcription Fetal Intestine Large intestine
37 chr10:116287400-116303200 Weak transcription Brain Anterior Caudate brain
38 chr10:116287400-116303800 Weak transcription Rectal Smooth Muscle rectum
39 chr10:116287400-116310600 Weak transcription Brain Angular Gyrus brain
40 chr10:116287400-116310600 Weak transcription Stomach Smooth Muscle stomach
41 chr10:116287600-116291600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr10:116287600-116291600 Weak transcription Fetal Intestine Small intestine
43 chr10:116287600-116291800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr10:116287600-116291800 Weak transcription Liver Liver
45 chr10:116287600-116292000 Weak transcription HepG2 liver
46 chr10:116287600-116292200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr10:116287600-116296400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr10:116287600-116297200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr10:116287600-116298000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr10:116287600-116298000 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015