The 2.0 version of rSNPBase

Variant report

Variant rs2483538
Chromosome Location chr10:116315451-116315452
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116305000-116317600 Weak transcription Fetal Muscle Trunk muscle
2 chr10:116305200-116316000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr10:116305200-116318200 Weak transcription Fetal Intestine Large intestine
4 chr10:116307600-116316000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr10:116307800-116317600 Weak transcription Fetal Intestine Small intestine
6 chr10:116308600-116315800 Weak transcription HepG2 liver
7 chr10:116309000-116316400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr10:116310800-116317400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr10:116311000-116317400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr10:116311000-116331400 Weak transcription Fetal Brain Male brain
11 chr10:116311600-116336600 Weak transcription Colonic Mucosa Colon
12 chr10:116311800-116317800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr10:116312000-116316800 Weak transcription Lung lung
14 chr10:116312000-116317200 Enhancers Fetal Heart heart
15 chr10:116312000-116324800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr10:116312000-116331000 Weak transcription Ovary ovary
17 chr10:116312000-116334600 Weak transcription Esophagus oesophagus
18 chr10:116312000-116335000 Weak transcription Brain Inferior Temporal Lobe brain
19 chr10:116312000-116335200 Weak transcription Pancreas Pancrea
20 chr10:116312200-116315800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr10:116312200-116317600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr10:116312200-116330800 Weak transcription Adipose Nuclei Adipose
23 chr10:116312400-116316000 Weak transcription Psoas Muscle Psoas
24 chr10:116312400-116316800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr10:116312400-116316800 Weak transcription HSMM muscle
26 chr10:116312400-116331200 Weak transcription Stomach Smooth Muscle stomach
27 chr10:116312600-116316000 Weak transcription Liver Liver
28 chr10:116312800-116317400 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr10:116313000-116317600 Weak transcription Fetal Muscle Leg muscle
30 chr10:116313000-116319200 Genic enhancers Left Ventricle heart
31 chr10:116313400-116316000 Weak transcription HSMMtube muscle
32 chr10:116314000-116316000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr10:116314200-116316800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr10:116314400-116316000 Weak transcription Right Atrium heart
35 chr10:116314600-116317000 Enhancers Skeletal Muscle Female skeletal muscle
36 chr10:116314800-116322400 Weak transcription Right Ventricle heart
37 chr10:116315400-116315800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015