The 2.0 version of rSNPBase

Variant report

Variant rs2497742
Chromosome Location chr10:116323962-116323963
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116311000-116331400 Weak transcription Fetal Brain Male brain
2 chr10:116311600-116336600 Weak transcription Colonic Mucosa Colon
3 chr10:116312000-116324800 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr10:116312000-116331000 Weak transcription Ovary ovary
5 chr10:116312000-116334600 Weak transcription Esophagus oesophagus
6 chr10:116312000-116335000 Weak transcription Brain Inferior Temporal Lobe brain
7 chr10:116312000-116335200 Weak transcription Pancreas Pancrea
8 chr10:116312200-116330800 Weak transcription Adipose Nuclei Adipose
9 chr10:116312400-116331200 Weak transcription Stomach Smooth Muscle stomach
10 chr10:116317000-116324800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr10:116318000-116335200 Weak transcription Psoas Muscle Psoas
12 chr10:116318000-116337200 Weak transcription Fetal Muscle Trunk muscle
13 chr10:116318200-116324800 Weak transcription Fetal Muscle Leg muscle
14 chr10:116318400-116324600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr10:116318400-116324600 Weak transcription HSMMtube muscle
16 chr10:116318400-116325200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr10:116318400-116328400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr10:116318400-116336600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr10:116318600-116325000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:116319000-116329400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr10:116319000-116330400 Weak transcription Fetal Intestine Small intestine
22 chr10:116319600-116329400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr10:116320400-116334000 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr10:116321400-116329400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr10:116321400-116336600 Weak transcription Fetal Lung lung
26 chr10:116322400-116331800 Strong transcription Liver Liver
27 chr10:116322800-116324400 Weak transcription Fetal Heart heart
28 chr10:116322800-116326000 Weak transcription Right Ventricle heart
29 chr10:116322800-116330600 Weak transcription Brain Substantia Nigra brain
30 chr10:116323000-116325200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr10:116323000-116329400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr10:116323000-116334600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr10:116323000-116336000 Weak transcription Lung lung
34 chr10:116323400-116352000 Weak transcription Primary hematopoietic stem cells blood
35 chr10:116323800-116324000 Enhancers Left Ventricle heart
36 chr10:116323800-116352000 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015