The 2.0 version of rSNPBase

Variant report

Variant rs11197006
Chromosome Location chr10:116709883-116709884
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116698800-116730400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr10:116698800-116763600 Weak transcription Esophagus oesophagus
3 chr10:116699200-116722400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr10:116699200-116722600 Weak transcription Aorta Aorta
5 chr10:116699600-116736400 Weak transcription NHLF lung
6 chr10:116699800-116722400 Weak transcription Fetal Kidney kidney
7 chr10:116699800-116726200 Weak transcription K562 blood
8 chr10:116700200-116714800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr10:116700600-116716000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr10:116700800-116713000 Strong transcription iPS-20b Cell Line embryonic stem cell
11 chr10:116700800-116722600 Weak transcription Fetal Brain Male brain
12 chr10:116701000-116715000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr10:116701200-116716200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr10:116701600-116713800 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr10:116702000-116710800 Strong transcription Duodenum Mucosa Duodenum
16 chr10:116702400-116715200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr10:116702400-116716000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr10:116703400-116730400 Weak transcription Pancreas Pancrea
19 chr10:116703600-116710400 Weak transcription H9 Cell Line embryonic stem cell
20 chr10:116703600-116714600 Weak transcription Colon Smooth Muscle Colon
21 chr10:116703600-116715200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr10:116703600-116716800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr10:116703600-116717000 Weak transcription Rectal Smooth Muscle rectum
24 chr10:116703600-116722200 Weak transcription Brain Cingulate Gyrus brain
25 chr10:116703600-116722400 Weak transcription Gastric stomach
26 chr10:116703600-116722400 Weak transcription Lung lung
27 chr10:116703600-116722400 Weak transcription Spleen Spleen
28 chr10:116703600-116722600 Weak transcription Brain Substantia Nigra brain
29 chr10:116703600-116740800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr10:116703600-116747800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr10:116704000-116713400 Weak transcription Psoas Muscle Psoas
32 chr10:116704000-116722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr10:116705000-116728000 Weak transcription Small Intestine intestine
34 chr10:116705200-116721800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr10:116705400-116711400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr10:116705400-116713400 Weak transcription Brain Germinal Matrix brain
37 chr10:116705400-116713400 Weak transcription Left Ventricle heart
38 chr10:116705400-116714400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr10:116705400-116717200 Weak transcription Right Ventricle heart
40 chr10:116705400-116722200 Weak transcription Fetal Brain Female brain
41 chr10:116705400-116735400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr10:116705400-116739400 Weak transcription Thymus Thymus
43 chr10:116705600-116711400 Weak transcription Primary B cells from cord blood blood
44 chr10:116705600-116712000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr10:116705600-116715800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr10:116705600-116719200 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr10:116705600-116722200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr10:116705600-116722200 Weak transcription Brain Angular Gyrus brain
49 chr10:116705600-116722200 Weak transcription Brain Anterior Caudate brain
50 chr10:116705600-116722200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015