The 2.0 version of rSNPBase

Variant report

Variant rs12779231
Chromosome Location chr10:116760094-116760095
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116698800-116763600 Weak transcription Esophagus oesophagus
2 chr10:116723000-116760800 Weak transcription Rectal Smooth Muscle rectum
3 chr10:116731000-116761200 Weak transcription Pancreas Pancrea
4 chr10:116742200-116761600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr10:116742600-116763400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr10:116742600-116763400 Weak transcription Lung lung
7 chr10:116745000-116761200 Weak transcription Adipose Nuclei Adipose
8 chr10:116745600-116760400 Weak transcription Liver Liver
9 chr10:116745800-116761800 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr10:116746000-116760800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr10:116746000-116761000 Weak transcription Primary B cells from cord blood blood
12 chr10:116746800-116761000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr10:116747200-116761200 Weak transcription Dnd41 blood
14 chr10:116747800-116760400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr10:116748200-116761000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr10:116748400-116761000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr10:116748400-116761000 Weak transcription Aorta Aorta
18 chr10:116748400-116761200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr10:116749000-116761200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr10:116750400-116760800 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr10:116752200-116760800 Weak transcription Brain Angular Gyrus brain
22 chr10:116752800-116761400 Weak transcription Placenta Placenta
23 chr10:116752800-116763600 Weak transcription Spleen Spleen
24 chr10:116754400-116761400 Weak transcription Primary T cells from cord blood blood
25 chr10:116755600-116761000 Weak transcription Stomach Smooth Muscle stomach
26 chr10:116756000-116761000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr10:116756000-116763400 Weak transcription Fetal Brain Male brain
28 chr10:116756200-116761200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr10:116757000-116760800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr10:116757200-116760600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr10:116757200-116760600 Weak transcription HSMM muscle
32 chr10:116757200-116761000 Weak transcription Ovary ovary
33 chr10:116757200-116761200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr10:116757200-116761200 Weak transcription NHDF-Ad bronchial
35 chr10:116757400-116761200 Weak transcription NH-A brain
36 chr10:116757800-116760800 Weak transcription HSMMtube muscle
37 chr10:116757800-116761000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr10:116757800-116761000 Weak transcription Brain Hippocampus Middle brain
39 chr10:116759200-116761200 Weak transcription H1 Cell Line embryonic stem cell
40 chr10:116759200-116761200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr10:116759200-116761600 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr10:116759200-116763400 Weak transcription H9 Cell Line embryonic stem cell
43 chr10:116759400-116761400 Active TSS Skeletal Muscle Female skeletal muscle
44 chr10:116759800-116760600 Enhancers Hela-S3 cervix
45 chr10:116759800-116760800 Enhancers Skeletal Muscle Male skeletal muscle
46 chr10:116759800-116761000 Enhancers Osteobl bone
47 chr10:116760000-116760400 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015