The 2.0 version of rSNPBase

Variant report

Variant rs11211067
Chromosome Location chr1:45488626-45488627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45478600-45500000 Weak transcription Aorta Aorta
2 chr1:45479000-45493000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:45480800-45500000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:45480800-45500600 Weak transcription HepG2 liver
5 chr1:45480800-45501200 Weak transcription Fetal Brain Male brain
6 chr1:45480800-45510400 Weak transcription Colon Smooth Muscle Colon
7 chr1:45481200-45504600 Weak transcription Colonic Mucosa Colon
8 chr1:45481200-45510200 Weak transcription Lung lung
9 chr1:45481200-45525000 Weak transcription Rectal Smooth Muscle rectum
10 chr1:45481200-45527400 Weak transcription Left Ventricle heart
11 chr1:45481400-45500000 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr1:45481600-45489400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:45481600-45491800 Weak transcription NHDF-Ad bronchial
14 chr1:45481600-45498600 Weak transcription Hela-S3 cervix
15 chr1:45481600-45499800 Weak transcription Fetal Intestine Large intestine
16 chr1:45481600-45499800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:45481800-45489600 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:45481800-45491400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:45481800-45499800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:45482000-45490600 Weak transcription Fetal Lung lung
21 chr1:45482000-45523800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:45484200-45499800 Weak transcription Fetal Stomach stomach
23 chr1:45484400-45499200 Weak transcription Stomach Smooth Muscle stomach
24 chr1:45484600-45488800 Weak transcription Spleen Spleen
25 chr1:45484600-45494800 Weak transcription Right Atrium heart
26 chr1:45484600-45499800 Weak transcription Brain Cingulate Gyrus brain
27 chr1:45484800-45497800 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:45484800-45499200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:45484800-45499400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:45484800-45499800 Weak transcription Brain Angular Gyrus brain
31 chr1:45484800-45499800 Weak transcription Brain Hippocampus Middle brain
32 chr1:45485000-45499800 Weak transcription Brain Substantia Nigra brain
33 chr1:45485800-45501400 Weak transcription Ovary ovary
34 chr1:45486200-45489400 Weak transcription Fetal Brain Female brain
35 chr1:45486400-45496600 Weak transcription Fetal Intestine Small intestine
36 chr1:45486600-45499200 Weak transcription Brain Anterior Caudate brain
37 chr1:45487400-45498600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:45487400-45499200 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015