Variant report

Variant rs12749939
Chromosome Location chr1:45478433-45478434
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45475600-45480400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:45475800-45478600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
3 chr1:45475800-45478800 Flanking Active TSS Primary B cells from cord blood blood
4 chr1:45475800-45479200 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr1:45476000-45478600 Active TSS Aorta Aorta
6 chr1:45476000-45479000 Active TSS Ovary ovary
7 chr1:45476400-45478600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:45476400-45478600 Active TSS Lung lung
9 chr1:45476400-45478800 Active TSS ES-WA7 Cell Line embryonic stem cell
10 chr1:45476600-45478600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
11 chr1:45477000-45478600 Flanking Active TSS Primary B cells from peripheral blood blood
12 chr1:45477000-45478600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
13 chr1:45477000-45478800 Flanking Active TSS Primary monocytes fromperipheralblood blood
14 chr1:45477000-45478800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
15 chr1:45477000-45478800 Flanking Active TSS Primary T cells from cord blood blood
16 chr1:45477000-45478800 Flanking Active TSS Primary T cells fromperipheralblood blood
17 chr1:45477000-45478800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
18 chr1:45477000-45478800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
19 chr1:45477000-45478800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
20 chr1:45477000-45478800 Flanking Active TSS Placenta Placenta
21 chr1:45477000-45478800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
22 chr1:45477000-45478800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
23 chr1:45477000-45479000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
24 chr1:45477000-45479000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
25 chr1:45477000-45479000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr1:45477000-45479000 Flanking Active TSS Adipose Nuclei Adipose
27 chr1:45477000-45479000 Flanking Active TSS Duodenum Mucosa Duodenum
28 chr1:45477000-45479000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
29 chr1:45477000-45479000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
30 chr1:45477000-45479000 Flanking Active TSS Fetal Brain Female brain
31 chr1:45477000-45479000 Flanking Active TSS Fetal Muscle Leg muscle
32 chr1:45477000-45479000 Flanking Active TSS Fetal Thymus thymus
33 chr1:45477000-45479000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
34 chr1:45477000-45479000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr1:45477000-45479000 Flanking Active TSS Osteobl bone
36 chr1:45477000-45479200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:45477000-45479200 Flanking Active TSS Liver Liver
38 chr1:45477000-45479200 Flanking Active TSS HUVEC blood vessel
39 chr1:45477000-45479400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
40 chr1:45477000-45480000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:45477200-45478600 Flanking Active TSS Fetal Brain Male brain
42 chr1:45477200-45478800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
43 chr1:45477200-45479000 Flanking Active TSS Stomach Smooth Muscle stomach
44 chr1:45477400-45479000 Active TSS H9 Cell Line embryonic stem cell
45 chr1:45477600-45478600 Active TSS H1 Cell Line embryonic stem cell
46 chr1:45477600-45478600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:45477600-45478600 Active TSS HUES6 Cell Line embryonic stem cell
48 chr1:45477600-45478600 Active TSS iPS-20b Cell Line embryonic stem cell
49 chr1:45477600-45478600 Active TSS Breast Myoepithelial Primary Cells Breast
50 chr1:45477600-45478600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin

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