The 2.0 version of rSNPBase

Variant report

Variant rs11211486
Chromosome Location chr1:47713412-47713413
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47705200-47766400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:47705600-47766400 Weak transcription Primary T cells from cord blood blood
3 chr1:47705800-47714800 Weak transcription Fetal Thymus thymus
4 chr1:47707600-47716600 Weak transcription Hela-S3 cervix
5 chr1:47707600-47722800 Weak transcription Primary hematopoietic stem cells blood
6 chr1:47708000-47715200 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:47709800-47714600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:47709800-47716000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:47709800-47725400 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:47709800-47726000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:47709800-47745000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:47710000-47716400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:47710000-47716600 Weak transcription H1 Cell Line embryonic stem cell
14 chr1:47710000-47716600 Weak transcription HUVEC blood vessel
15 chr1:47710400-47716600 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr1:47711000-47715200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:47711000-47727800 Weak transcription A549 lung
18 chr1:47711200-47715600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:47711200-47716600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:47711400-47716200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:47711800-47715200 Weak transcription Thymus Thymus
22 chr1:47711800-47716600 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:47712200-47718600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr1:47712400-47714800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:47712400-47716400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:47712400-47720400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:47712600-47716600 Weak transcription Dnd41 blood
28 chr1:47712600-47724200 Weak transcription Fetal Intestine Large intestine
29 chr1:47712600-47735000 Weak transcription NHDF-Ad bronchial
30 chr1:47712600-47742600 Weak transcription Fetal Lung lung
31 chr1:47712800-47729600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:47712800-47745600 Weak transcription Fetal Brain Female brain
33 chr1:47713000-47715200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:47713000-47715400 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:47713000-47736400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:47713200-47716600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr1:47713200-47716600 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr1:47713200-47717000 Weak transcription HepG2 liver
39 chr1:47713200-47745800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:47713400-47713800 Enhancers K562 blood
41 chr1:47713400-47716600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:47713400-47716600 Weak transcription Fetal Muscle Leg muscle
43 chr1:47713400-47716600 Weak transcription HMEC breast
44 chr1:47713400-47716600 Weak transcription HSMM muscle
45 chr1:47713400-47716600 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015