The 2.0 version of rSNPBase

Variant report

Variant rs11229551
Chromosome Location chr11:58397662-58397663
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58385600-58400400 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr11:58386800-58400000 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr11:58392000-58406000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr11:58392200-58399200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr11:58392200-58400800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:58392400-58402000 Weak transcription Fetal Intestine Small intestine
7 chr11:58392600-58400600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr11:58392800-58399400 Weak transcription Lung lung
9 chr11:58393000-58398600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr11:58393000-58400000 Weak transcription Ovary ovary
11 chr11:58393000-58407200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr11:58393200-58398600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr11:58393200-58398600 Weak transcription Fetal Stomach stomach
14 chr11:58393200-58399600 Weak transcription Right Ventricle heart
15 chr11:58393200-58400200 Weak transcription H9 Cell Line embryonic stem cell
16 chr11:58393200-58407000 Weak transcription Thymus Thymus
17 chr11:58393600-58399000 Weak transcription Pancreas Pancrea
18 chr11:58393800-58397800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr11:58393800-58399400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr11:58393800-58401000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr11:58393800-58406200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr11:58393800-58407800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr11:58394000-58398400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr11:58394000-58398800 Weak transcription Fetal Brain Female brain
25 chr11:58394000-58399400 Weak transcription Liver Liver
26 chr11:58394000-58399800 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr11:58394000-58407200 Weak transcription Left Ventricle heart
28 chr11:58394000-58407800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr11:58394600-58398000 Weak transcription K562 blood
30 chr11:58394600-58398400 Weak transcription Fetal Intestine Large intestine
31 chr11:58394600-58399000 Weak transcription Fetal Muscle Leg muscle
32 chr11:58394600-58399800 Weak transcription A549 lung
33 chr11:58394600-58400600 Weak transcription H1 Cell Line embryonic stem cell
34 chr11:58394600-58401600 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr11:58394600-58407200 Weak transcription Primary T cells from cord blood blood
36 chr11:58394600-58407200 Weak transcription Primary hematopoietic stem cells blood
37 chr11:58394800-58397800 Weak transcription Fetal Muscle Trunk muscle
38 chr11:58394800-58400600 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr11:58394800-58400600 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr11:58394800-58400800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr11:58394800-58400800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr11:58394800-58400800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr11:58394800-58407000 Weak transcription Primary T cells fromperipheralblood blood
44 chr11:58394800-58408200 Weak transcription Duodenum Mucosa Duodenum
45 chr11:58395200-58400000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr11:58395200-58402000 Weak transcription GM12878-XiMat blood
47 chr11:58395200-58403600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr11:58395200-58407000 Weak transcription Primary monocytes fromperipheralblood blood
49 chr11:58395200-58407000 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr11:58395600-58397800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015