Variant report

Variant	rs11236366
Chromosome Location	chr11:74888421-74888422
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:74880288..74883230-chr11:74887278..74889669,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs3781723	0.83[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054122	chr11:74872792-74895241	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74864200-74898400	Weak transcription	Esophagus	oesophagus
2	chr11:74870800-74901600	Weak transcription	Rectal Smooth Muscle	rectum
3	chr11:74876200-74906200	Weak transcription	Spleen	Spleen
4	chr11:74880800-74911000	Weak transcription	Gastric	stomach
5	chr11:74881200-74905600	Weak transcription	Pancreas	Pancrea
6	chr11:74881600-74916000	Weak transcription	Small Intestine	intestine
7	chr11:74883600-74889800	Strong transcription	Fetal Intestine Small	intestine
8	chr11:74883600-74895000	Weak transcription	Colonic Mucosa	Colon
9	chr11:74884800-74894400	Weak transcription	HepG2	liver
10	chr11:74884800-74898200	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr11:74886000-74891800	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr11:74886600-74901600	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr11:74886800-74894600	Weak transcription	Brain Cingulate Gyrus	brain
14	chr11:74887000-74888600	Strong transcription	Rectal Mucosa Donor 29	rectum
15	chr11:74887000-74889800	Strong transcription	Duodenum Mucosa	Duodenum
16	chr11:74887000-74893000	Weak transcription	Brain Hippocampus Middle	brain
17	chr11:74887000-74902800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr11:74887200-74888600	Strong transcription	Fetal Intestine Large	intestine
19	chr11:74887200-74890200	Strong transcription	Liver	Liver
20	chr11:74887200-74891800	Weak transcription	Skeletal Muscle Female	skeletal muscle
21	chr11:74887200-74892600	Weak transcription	Fetal Stomach	stomach
22	chr11:74887200-74892600	Weak transcription	Left Ventricle	heart
23	chr11:74887200-74892600	Weak transcription	Lung	lung
24	chr11:74887200-74901200	Weak transcription	Right Atrium	heart
25	chr11:74887400-74889600	Weak transcription	Brain Substantia Nigra	brain
26	chr11:74887400-74892400	Weak transcription	Fetal Muscle Trunk	muscle
27	chr11:74887400-74892400	Weak transcription	Placenta	Placenta
28	chr11:74887400-74892600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr11:74887400-74892600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
30	chr11:74887600-74891800	Weak transcription	Primary monocytes fromperipheralblood	blood
31	chr11:74887600-74891800	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr11:74887600-74892000	Weak transcription	Sigmoid Colon	Sigmoid Colon
33	chr11:74887800-74892800	Weak transcription	Adipose Nuclei	Adipose
34	chr11:74888000-74892200	Weak transcription	Fetal Muscle Leg	muscle
35	chr11:74888000-74892600	Weak transcription	Right Ventricle	heart
36	chr11:74888200-74892600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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