Variant report

Variant	rs11236476
Chromosome Location	chr11:75359175-75359176
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11236451	1.00[ASW][hapmap];1.00[LWK][hapmap]
rs41464948	0.84[CHB][hapmap];0.88[CHD][hapmap];0.81[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3381903	chr11:75123498-75587233	Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	81 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75351600-75362000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:75351600-75362000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr11:75351600-75366600	Weak transcription	Brain Anterior Caudate	brain
4	chr11:75353800-75366400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr11:75355000-75362600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr11:75355000-75366200	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr11:75355200-75366400	Weak transcription	Fetal Brain Male	brain
8	chr11:75355400-75361200	Weak transcription	Fetal Brain Female	brain
9	chr11:75355400-75362400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr11:75356200-75362000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr11:75357000-75365200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr11:75359000-75364200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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