Variant report

Variant rs11252693
Chromosome Location chr10:532139-532140
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:517000-536800 Weak transcription H9 Cell Line embryonic stem cell
2 chr10:523000-532600 Weak transcription Spleen Spleen
3 chr10:524400-532400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:526200-532600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr10:530000-533400 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr10:530400-532600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr10:530600-536000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr10:531000-532600 Flanking Active TSS Stomach Smooth Muscle stomach
9 chr10:531000-533200 Enhancers Fetal Heart heart
10 chr10:531000-533600 Enhancers Fetal Brain Male brain
11 chr10:531200-532400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr10:531200-532800 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
13 chr10:531200-532800 Strong transcription Fetal Intestine Small intestine
14 chr10:531200-533000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr10:531200-533400 Enhancers Brain Germinal Matrix brain
16 chr10:531200-536200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr10:531200-536200 Weak transcription Placenta Placenta
18 chr10:531200-536800 Weak transcription Fetal Intestine Large intestine
19 chr10:531400-532200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr10:531400-532400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr10:531400-532400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr10:531400-532400 Enhancers Left Ventricle heart
23 chr10:531400-532600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr10:531400-532800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
25 chr10:531400-532800 Enhancers Fetal Lung lung
26 chr10:531400-533000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr10:531400-533000 Enhancers Fetal Muscle Trunk muscle
28 chr10:531400-533200 Enhancers H1 Cell Line embryonic stem cell
29 chr10:531400-533200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr10:531400-533200 Enhancers Fetal Brain Female brain
31 chr10:531400-533400 Enhancers Brain Inferior Temporal Lobe brain
32 chr10:531400-533400 Enhancers Rectal Smooth Muscle rectum
33 chr10:531400-533600 Enhancers Cortex derived primary cultured neurospheres brain
34 chr10:531400-534200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr10:531400-534400 Weak transcription Lung lung
36 chr10:531400-534600 Weak transcription Aorta Aorta
37 chr10:531400-534600 Weak transcription Right Atrium heart
38 chr10:531400-535600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr10:531400-536200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr10:531400-536200 Weak transcription NHLF lung
41 chr10:531400-536800 Weak transcription Esophagus oesophagus
42 chr10:531400-545800 Weak transcription Gastric stomach
43 chr10:531600-532200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr10:531600-532200 Weak transcription Fetal Thymus thymus
45 chr10:531600-532200 Weak transcription Ovary ovary
46 chr10:531600-532400 Enhancers Psoas Muscle Psoas
47 chr10:531600-532600 Enhancers NH-A brain
48 chr10:531600-532800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr10:531600-533000 Enhancers Fetal Stomach stomach
50 chr10:531600-533200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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