Variant report

Variant rs11253253
Chromosome Location chr10:621653-621654
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:616000-621800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr10:616200-622600 Enhancers Brain Inferior Temporal Lobe brain
3 chr10:616200-643800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:616400-623600 Enhancers Brain Hippocampus Middle brain
5 chr10:616600-621800 Enhancers Brain Anterior Caudate brain
6 chr10:616600-621800 Weak transcription Esophagus oesophagus
7 chr10:616600-622600 Enhancers Brain Angular Gyrus brain
8 chr10:617200-623400 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr10:617400-622600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr10:617800-621800 Weak transcription Fetal Thymus thymus
11 chr10:617800-622000 Weak transcription H1 Cell Line embryonic stem cell
12 chr10:618200-622000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr10:618200-626200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr10:618400-621800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr10:618400-622200 Weak transcription Fetal Intestine Large intestine
16 chr10:618400-625800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr10:619000-622200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr10:619800-622000 Enhancers Brain Cingulate Gyrus brain
19 chr10:620000-627000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr10:620400-622000 Enhancers Fetal Brain Female brain
21 chr10:620400-622400 Enhancers Pancreas Pancrea
22 chr10:620400-623200 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr10:620600-622400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
24 chr10:620600-644400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr10:620800-621800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr10:620800-622000 Enhancers Fetal Kidney kidney
27 chr10:620800-622600 Enhancers Adipose Nuclei Adipose
28 chr10:620800-622800 Enhancers Colon Smooth Muscle Colon
29 chr10:620800-623200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr10:620800-623600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr10:620800-623800 Enhancers Pancreatic Islets Pancreatic Islet
32 chr10:621000-622800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr10:621000-623000 Enhancers Duodenum Smooth Muscle Duodenum
34 chr10:621200-621800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr10:621200-621800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr10:621200-622200 Enhancers Aorta Aorta
37 chr10:621200-622400 Enhancers Gastric stomach
38 chr10:621200-622800 Enhancers Brain Substantia Nigra brain
39 chr10:621200-622800 Enhancers Fetal Muscle Leg muscle
40 chr10:621200-623000 Enhancers Left Ventricle heart
41 chr10:621200-623200 Enhancers Fetal Heart heart
42 chr10:621400-621800 Enhancers Fetal Lung lung
43 chr10:621400-622000 Enhancers Fetal Intestine Small intestine
44 chr10:621400-622200 Flanking Active TSS Stomach Smooth Muscle stomach
45 chr10:621400-622400 Enhancers Duodenum Mucosa Duodenum
46 chr10:621400-622600 Enhancers Cortex derived primary cultured neurospheres brain
47 chr10:621400-622600 Enhancers Liver Liver
48 chr10:621400-622600 Enhancers Fetal Stomach stomach
49 chr10:621400-622600 Enhancers Lung lung
50 chr10:621400-622600 Enhancers Rectal Smooth Muscle rectum

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