Variant report

Variant rs1621280
Chromosome Location chr10:566592-566593
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:552600-567800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr10:553200-567000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr10:557600-568000 Weak transcription NHDF-Ad bronchial
4 chr10:557600-572600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr10:557600-577600 Weak transcription NHLF lung
6 chr10:557800-582200 Weak transcription Osteobl bone
7 chr10:558000-568000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr10:559600-576000 Weak transcription Spleen Spleen
9 chr10:560400-568400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr10:560400-571200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr10:560600-567800 Weak transcription Small Intestine intestine
12 chr10:560800-568400 Weak transcription Esophagus oesophagus
13 chr10:560800-571600 Weak transcription Right Ventricle heart
14 chr10:560800-572800 Weak transcription Lung lung
15 chr10:560800-575000 Weak transcription Duodenum Mucosa Duodenum
16 chr10:561000-567400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr10:562200-567200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr10:562200-567800 Weak transcription Left Ventricle heart
19 chr10:562200-567800 Weak transcription Right Atrium heart
20 chr10:563000-568800 Enhancers Skeletal Muscle Female skeletal muscle
21 chr10:563200-568200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr10:563600-568400 Weak transcription HSMM muscle
23 chr10:563600-571200 Weak transcription HSMMtube muscle
24 chr10:564600-568400 Weak transcription Fetal Brain Female brain
25 chr10:564600-571600 Weak transcription Psoas Muscle Psoas
26 chr10:564800-566600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr10:564800-567200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr10:565000-567200 Weak transcription Brain Angular Gyrus brain
29 chr10:565000-567800 Weak transcription Brain Germinal Matrix brain
30 chr10:565000-568200 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr10:565200-567200 Weak transcription Brain Hippocampus Middle brain
32 chr10:565200-567400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr10:565200-567400 Weak transcription Pancreas Pancrea
34 chr10:565400-567000 Weak transcription Brain Substantia Nigra brain
35 chr10:565400-568000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr10:565400-568000 Enhancers Ovary ovary
37 chr10:565600-566600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr10:565600-567200 Weak transcription Fetal Brain Male brain
39 chr10:565600-567400 Weak transcription Brain Cingulate Gyrus brain
40 chr10:565600-568200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr10:565600-569000 Enhancers Rectal Smooth Muscle rectum
42 chr10:565800-566800 Enhancers HUES6 Cell Line embryonic stem cell
43 chr10:565800-567200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr10:565800-567400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr10:565800-569600 Enhancers Brain Anterior Caudate brain
46 chr10:565800-571800 Weak transcription Gastric stomach
47 chr10:566000-566600 Enhancers Placenta Placenta
48 chr10:566000-567200 Enhancers HUES64 Cell Line embryonic stem cell
49 chr10:566000-567200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr10:566000-567600 Enhancers NHEK skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links