Variant report

Variant rs816582
Chromosome Location chr10:557749-557750
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:545400-565000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr10:547000-560200 Weak transcription Aorta Aorta
3 chr10:552600-567800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr10:553000-559400 Weak transcription Gastric stomach
5 chr10:553200-567000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr10:555000-558000 Enhancers Left Ventricle heart
7 chr10:555000-558200 Enhancers Fetal Heart heart
8 chr10:555200-558000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr10:555200-558000 Enhancers Fetal Brain Male brain
10 chr10:555200-558200 Enhancers Brain Hippocampus Middle brain
11 chr10:555200-558600 Enhancers Cortex derived primary cultured neurospheres brain
12 chr10:555200-559400 Weak transcription Spleen Spleen
13 chr10:555400-558200 Enhancers Fetal Muscle Trunk muscle
14 chr10:555600-564000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr10:555800-557800 Enhancers Fetal Stomach stomach
16 chr10:556000-557800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr10:556000-558000 Enhancers Fetal Muscle Leg muscle
18 chr10:556000-558000 Flanking Active TSS Stomach Smooth Muscle stomach
19 chr10:556000-564200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr10:556200-558000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr10:556200-558200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr10:556400-558000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
23 chr10:556400-558000 Enhancers Fetal Lung lung
24 chr10:556400-558000 Enhancers Stomach Mucosa stomach
25 chr10:556600-557800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr10:556600-558000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr10:556600-559200 Weak transcription Lung lung
28 chr10:556600-559400 Weak transcription Right Ventricle heart
29 chr10:556800-557800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr10:556800-557800 Enhancers Fetal Intestine Small intestine
31 chr10:556800-558000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr10:556800-558000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr10:556800-558000 Enhancers Psoas Muscle Psoas
34 chr10:556800-558000 Enhancers Rectal Mucosa Donor 31 rectum
35 chr10:556800-558000 Enhancers HSMMtube muscle
36 chr10:556800-558400 Enhancers Placenta Amnion Placenta Amnion
37 chr10:557000-557800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr10:557000-557800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr10:557000-558000 Enhancers Brain Cingulate Gyrus brain
40 chr10:557000-558000 Enhancers Duodenum Smooth Muscle Duodenum
41 chr10:557000-558200 Enhancers HSMM muscle
42 chr10:557000-559200 Weak transcription Colonic Mucosa Colon
43 chr10:557000-559400 Weak transcription Esophagus oesophagus
44 chr10:557000-559400 Weak transcription Fetal Brain Female brain
45 chr10:557000-559600 Enhancers Colon Smooth Muscle Colon
46 chr10:557200-557800 Enhancers A549 lung
47 chr10:557200-558000 Enhancers Brain Inferior Temporal Lobe brain
48 chr10:557200-558200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr10:557200-559200 Enhancers Rectal Smooth Muscle rectum
50 chr10:557200-559400 Weak transcription Right Atrium heart

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