Variant report

Variant	rs11265948
Chromosome Location	chr9:92492501-92492502
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11265925	0.91[EUR][1000 genomes]
rs11265928	0.88[CEU][hapmap];0.94[EUR][1000 genomes]
rs11265929	0.86[CEU][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265930	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265931	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265932	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265933	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265934	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265935	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11265936	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11265937	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11265938	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11265943	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11265944	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs11265947	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12377271	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12379679	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs28461415	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28613326	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92465800-92507200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:92484000-92495000	Weak transcription	Spleen	Spleen
3	chr9:92488600-92496200	Weak transcription	Fetal Heart	heart
4	chr9:92489600-92497200	Enhancers	Liver	Liver
5	chr9:92491800-92506600	Enhancers	Placenta	Placenta
6	chr9:92492000-92493200	Enhancers	Fetal Intestine Small	intestine
7	chr9:92492000-92493400	Enhancers	Esophagus	oesophagus
8	chr9:92492000-92493600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr9:92492200-92492600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr9:92492200-92492600	Enhancers	Duodenum Mucosa	Duodenum
11	chr9:92492200-92492600	Enhancers	Sigmoid Colon	Sigmoid Colon
12	chr9:92492200-92492600	Enhancers	NHEK	skin
13	chr9:92492200-92493400	Enhancers	Fetal Intestine Large	intestine
14	chr9:92492400-92492600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr9:92492400-92493200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr9:92492400-92493200	Weak transcription	Fetal Lung	lung
17	chr9:92492400-92494600	Weak transcription	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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