Variant report

Variant rs1130576
Chromosome Location chr6:31236668-31236669
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31232600-31236800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr6:31233200-31238200 Weak transcription Stomach Mucosa stomach
3 chr6:31233200-31238400 Weak transcription Small Intestine intestine
4 chr6:31233800-31236800 Weak transcription Stomach Smooth Muscle stomach
5 chr6:31234000-31236800 Weak transcription Rectal Smooth Muscle rectum
6 chr6:31234000-31237000 Weak transcription Colon Smooth Muscle Colon
7 chr6:31234400-31236800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr6:31234400-31237000 Weak transcription Ovary ovary
9 chr6:31234600-31236800 Weak transcription Dnd41 blood
10 chr6:31234800-31237400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr6:31235000-31238600 Weak transcription HSMM muscle
12 chr6:31235200-31236800 Genic enhancers Primary neutrophils fromperipheralblood blood
13 chr6:31235200-31237000 Genic enhancers Primary T cells from cord blood blood
14 chr6:31235200-31237000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr6:31235200-31238400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr6:31235400-31236800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr6:31235400-31236800 Strong transcription Sigmoid Colon Sigmoid Colon
18 chr6:31235400-31237400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:31235400-31237800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr6:31235600-31236800 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr6:31235600-31236800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:31235600-31236800 Genic enhancers Primary T helper cells fromperipheralblood blood
23 chr6:31235600-31236800 Strong transcription Skeletal Muscle Female skeletal muscle
24 chr6:31235600-31236800 Weak transcription NHEK skin
25 chr6:31235600-31237000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr6:31235600-31237000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr6:31235600-31237000 Strong transcription Liver Liver
28 chr6:31235600-31237000 Genic enhancers Rectal Mucosa Donor 31 rectum
29 chr6:31235600-31237200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr6:31235600-31237200 Genic enhancers Rectal Mucosa Donor 29 rectum
31 chr6:31235600-31237400 Strong transcription Primary hematopoietic stem cells blood
32 chr6:31235600-31237400 Strong transcription Left Ventricle heart
33 chr6:31235600-31238200 Strong transcription H1 Cell Line embryonic stem cell
34 chr6:31235600-31238400 Genic enhancers Spleen Spleen
35 chr6:31235600-31238400 Weak transcription NH-A brain
36 chr6:31235600-31238800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr6:31235600-31238800 Weak transcription Fetal Kidney kidney
38 chr6:31235800-31236800 Strong transcription Primary monocytes fromperipheralblood blood
39 chr6:31235800-31236800 Strong transcription Adipose Nuclei Adipose
40 chr6:31235800-31236800 Genic enhancers Duodenum Mucosa Duodenum
41 chr6:31235800-31237000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
42 chr6:31235800-31237200 Strong transcription Placenta Placenta
43 chr6:31235800-31237200 Strong transcription Fetal Thymus thymus
44 chr6:31235800-31237200 Strong transcription Gastric stomach
45 chr6:31235800-31237400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr6:31235800-31237400 Strong transcription Esophagus oesophagus
47 chr6:31235800-31237600 Strong transcription NHLF lung
48 chr6:31235800-31238000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr6:31235800-31238000 Genic enhancers Primary B cells from peripheral blood blood
50 chr6:31235800-31238200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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