Variant report

Variant	rs114601382
Chromosome Location	chr6:34926724-34926725
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:34926256..34928319-chr6:34929581..34931130,2	K562	blood:
2	chr6:34924286..34927204-chr6:35101773..35103995,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022844	chr6:34317219-35060519	Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
2	nsv538195	chr6:34317219-35060519	Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
3	nsv1026121	chr6:34786887-34961360	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	19 gene(s)	inside rSNPs	diseases
4	nsv885797	chr6:34791027-34980601	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	18 gene(s)	inside rSNPs	diseases
5	nsv1033135	chr6:34802652-34957093	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA target site	18 gene(s)	inside rSNPs	diseases
6	nsv508402	chr6:34840961-34951288	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	17 gene(s)	inside rSNPs	diseases
7	nsv5257	chr6:34925313-34970101	ZNF genes & repeats Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
8	nsv970660	chr6:34925366-34929971	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:91 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34881200-34928200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr6:34895800-34949200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:34896000-34934600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr6:34903200-34927800	Weak transcription	Fetal Muscle Trunk	muscle
5	chr6:34904600-34937400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:34907400-34937600	Weak transcription	Dnd41	blood
7	chr6:34912400-34928000	Weak transcription	Primary T helper cells fromperipheralblood	blood
8	chr6:34916800-34927800	Weak transcription	Lung	lung
9	chr6:34917200-34926800	Weak transcription	Spleen	Spleen
10	chr6:34918600-34938400	Weak transcription	Thymus	Thymus
11	chr6:34919000-34929600	Weak transcription	Fetal Kidney	kidney
12	chr6:34919800-34937200	Weak transcription	NHEK	skin
13	chr6:34920000-34937400	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr6:34920000-34937400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr6:34920400-34958600	Weak transcription	Colonic Mucosa	Colon
16	chr6:34921200-34937600	Weak transcription	Aorta	Aorta
17	chr6:34921200-34949400	Weak transcription	Esophagus	oesophagus
18	chr6:34921400-34927800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr6:34921400-34937400	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr6:34921600-34926800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr6:34921600-34937600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr6:34921600-34937800	Weak transcription	HUES48 Cell Line	embryonic stem cell
23	chr6:34921600-34949400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr6:34921800-34938800	Weak transcription	HMEC	breast
25	chr6:34922000-34928200	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr6:34922000-34953800	Weak transcription	Hela-S3	cervix
27	chr6:34922200-34932200	Weak transcription	Osteobl	bone
28	chr6:34922200-34937400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr6:34922600-34927600	Weak transcription	Pancreas	Pancrea
30	chr6:34922600-34937400	Weak transcription	HepG2	liver
31	chr6:34922600-34940200	Weak transcription	A549	lung
32	chr6:34922600-34940800	Weak transcription	Stomach Mucosa	stomach
33	chr6:34922800-34937400	Weak transcription	Duodenum Mucosa	Duodenum
34	chr6:34922800-34950200	Weak transcription	Brain Germinal Matrix	brain
35	chr6:34923600-34928000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr6:34923600-34928000	Weak transcription	Primary T helper cells PMA-I stimulated	--
37	chr6:34923600-34936800	Weak transcription	K562	blood
38	chr6:34923800-34929000	Weak transcription	Primary B cells from peripheral blood	blood
39	chr6:34923800-34937400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr6:34924200-34928800	Weak transcription	Primary B cells from cord blood	blood
41	chr6:34924200-34929600	Enhancers	Adipose Nuclei	Adipose
42	chr6:34924400-34927000	Enhancers	Fetal Thymus	thymus
43	chr6:34924400-34927200	Enhancers	Brain Anterior Caudate	brain
44	chr6:34924400-34927200	Enhancers	Rectal Smooth Muscle	rectum
45	chr6:34924400-34927600	Enhancers	Brain Hippocampus Middle	brain
46	chr6:34924400-34928200	Enhancers	Fetal Stomach	stomach
47	chr6:34924400-34929000	Enhancers	Skeletal Muscle Male	skeletal muscle
48	chr6:34924400-34929600	Enhancers	Right Ventricle	heart
49	chr6:34924600-34927200	Enhancers	Brain Cingulate Gyrus	brain
50	chr6:34924600-34927200	Enhancers	Brain Substantia Nigra	brain

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