The 2.0 version of rSNPBase

Variant report

Variant rs1146589
Chromosome Location chr1:76231045-76231046
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76208800-76231400 Weak transcription A549 lung
2 chr1:76208800-76231400 Weak transcription NHEK skin
3 chr1:76208800-76231600 Weak transcription Hela-S3 cervix
4 chr1:76210200-76231800 Weak transcription HSMMtube muscle
5 chr1:76217600-76231400 Weak transcription Osteobl bone
6 chr1:76221200-76231400 Weak transcription Gastric stomach
7 chr1:76221200-76238400 Weak transcription Brain Cingulate Gyrus brain
8 chr1:76221400-76231200 Weak transcription NH-A brain
9 chr1:76221400-76231400 Weak transcription Pancreas Pancrea
10 chr1:76221400-76233200 Weak transcription Brain Anterior Caudate brain
11 chr1:76221600-76231200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:76221600-76231400 Weak transcription Fetal Heart heart
13 chr1:76221600-76231400 Weak transcription Ovary ovary
14 chr1:76221600-76231400 Weak transcription HSMM muscle
15 chr1:76221600-76231600 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr1:76221600-76231600 Weak transcription Esophagus oesophagus
17 chr1:76221600-76231800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr1:76221600-76232200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:76221600-76234200 Weak transcription Thymus Thymus
20 chr1:76221800-76231400 Weak transcription Primary T cells from cord blood blood
21 chr1:76221800-76232600 Weak transcription Fetal Brain Male brain
22 chr1:76222000-76231200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:76222000-76231600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:76222000-76231600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:76222000-76231600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:76222000-76233400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr1:76222000-76233800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:76222000-76236600 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:76222000-76237000 Weak transcription Brain Angular Gyrus brain
30 chr1:76222200-76231600 Weak transcription Brain Hippocampus Middle brain
31 chr1:76223800-76236600 Weak transcription H1 Cell Line embryonic stem cell
32 chr1:76224200-76231600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:76224400-76231400 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:76224400-76232800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:76224600-76231600 Weak transcription Fetal Brain Female brain
36 chr1:76224800-76231400 Weak transcription Fetal Intestine Small intestine
37 chr1:76224800-76231600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:76225200-76231200 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr1:76225200-76231200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:76225200-76231400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:76225200-76231800 Weak transcription Spleen Spleen
42 chr1:76226800-76231600 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:76227400-76249800 Weak transcription Primary B cells from peripheral blood blood
44 chr1:76227800-76233200 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr1:76227800-76239600 Weak transcription GM12878-XiMat blood
46 chr1:76228200-76233600 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:76228800-76233600 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:76229800-76231400 Weak transcription Dnd41 blood
49 chr1:76230000-76231400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:76230000-76231600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015