Variant report

Variant	rs1147904
Chromosome Location	chr10:44464611-44464612
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1147907	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1147908	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1147909	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12413005	0.89[ASN][1000 genomes]
rs1254673	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1254674	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1254848	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1254860	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1380838	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1460542	0.98[ASN][1000 genomes]
rs1492711	0.81[JPT][hapmap]
rs1977341	0.98[ASN][1000 genomes]
rs2798998	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73283848	0.99[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44460200-44466000	Weak transcription	Right Ventricle	heart
2	chr10:44460200-44466800	Weak transcription	Spleen	Spleen
3	chr10:44461800-44469000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr10:44462000-44474400	Weak transcription	Left Ventricle	heart
5	chr10:44462400-44475200	Weak transcription	Right Atrium	heart
6	chr10:44463600-44467200	Weak transcription	Ovary	ovary
7	chr10:44464400-44465400	Weak transcription	Fetal Heart	heart
8	chr10:44464600-44467200	Enhancers	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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