Variant report

Variant	rs1149458
Chromosome Location	chr8:64553145-64553146
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1149454	1.00[ASN][1000 genomes]
rs1149459	1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs11778153	1.00[ASN][1000 genomes]
rs11780231	1.00[ASN][1000 genomes]
rs11781864	0.80[GIH][hapmap];1.00[ASN][1000 genomes]
rs1869187	1.00[ASN][1000 genomes]
rs2044969	1.00[ASN][1000 genomes]
rs2354862	1.00[ASN][1000 genomes]
rs34391115	1.00[ASN][1000 genomes]
rs35788730	1.00[ASN][1000 genomes]
rs57947022	1.00[ASN][1000 genomes]
rs73270957	1.00[ASN][1000 genomes]
rs813755	0.88[AFR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64545800-64554600	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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