Variant report

Variant	rs57947022
Chromosome Location	chr8:64496875-64496876
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1149454	1.00[ASN][1000 genomes]
rs1149458	1.00[ASN][1000 genomes]
rs11778153	1.00[ASN][1000 genomes]
rs11780231	1.00[ASN][1000 genomes]
rs11781864	1.00[ASN][1000 genomes]
rs1869187	1.00[ASN][1000 genomes]
rs2044969	1.00[ASN][1000 genomes]
rs2354862	1.00[ASN][1000 genomes]
rs34391115	1.00[ASN][1000 genomes]
rs35788730	1.00[ASN][1000 genomes]
rs73270957	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831343	chr8:64436268-64642328	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64489400-64498600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:64496800-64497200	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr8:64496800-64497200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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