The 2.0 version of rSNPBase

Variant report

Variant rs11503806
Chromosome Location chr12:42507509-42507510
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42471800-42524400 Weak transcription Esophagus oesophagus
2 chr12:42474600-42514400 Weak transcription Fetal Muscle Trunk muscle
3 chr12:42474600-42518800 Weak transcription Brain Anterior Caudate brain
4 chr12:42476000-42524400 Weak transcription Gastric stomach
5 chr12:42476200-42524400 Weak transcription Pancreas Pancrea
6 chr12:42476600-42523800 Weak transcription Hela-S3 cervix
7 chr12:42478600-42511600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr12:42480200-42512000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:42483600-42511400 Weak transcription Stomach Smooth Muscle stomach
10 chr12:42484400-42524800 Weak transcription Right Ventricle heart
11 chr12:42485200-42511600 Weak transcription NHDF-Ad bronchial
12 chr12:42485800-42512200 Weak transcription Brain Angular Gyrus brain
13 chr12:42486000-42513000 Weak transcription Aorta Aorta
14 chr12:42488400-42512000 Weak transcription Osteobl bone
15 chr12:42488600-42518600 Weak transcription Fetal Brain Male brain
16 chr12:42488800-42511800 Weak transcription HepG2 liver
17 chr12:42490800-42511200 Weak transcription HSMM muscle
18 chr12:42491400-42511200 Weak transcription A549 lung
19 chr12:42492200-42511400 Weak transcription Adipose Nuclei Adipose
20 chr12:42492200-42511600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr12:42492200-42512400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr12:42492200-42518600 Weak transcription K562 blood
23 chr12:42492400-42511400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr12:42492400-42511600 Weak transcription Primary T cells fromperipheralblood blood
25 chr12:42492400-42511600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr12:42492400-42512200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr12:42492400-42512200 Weak transcription HUVEC blood vessel
28 chr12:42492600-42511400 Weak transcription Dnd41 blood
29 chr12:42492600-42511800 Weak transcription Primary T cells from cord blood blood
30 chr12:42493000-42511600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr12:42493000-42511600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr12:42493000-42524400 Weak transcription Brain Substantia Nigra brain
33 chr12:42493000-42534400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr12:42493200-42511400 Weak transcription HMEC breast
35 chr12:42493200-42518400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr12:42493200-42519200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr12:42497200-42518800 Weak transcription Psoas Muscle Psoas
38 chr12:42498800-42513000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr12:42499000-42516800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr12:42499200-42512200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr12:42499400-42518800 Weak transcription Fetal Kidney kidney
42 chr12:42499800-42508000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr12:42500400-42511200 Weak transcription Liver Liver
44 chr12:42500800-42511400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr12:42501000-42518800 Weak transcription Colon Smooth Muscle Colon
46 chr12:42501200-42512200 Weak transcription Muscle Satellite Cultured Cells --
47 chr12:42501400-42511800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr12:42501800-42511400 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr12:42502200-42511400 Weak transcription Primary B cells from cord blood blood
50 chr12:42502600-42511200 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015