The 2.0 version of rSNPBase

Variant report

Variant rs59317114
Chromosome Location chr12:42500550-42500551
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42471000-42504200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr12:42471800-42524400 Weak transcription Esophagus oesophagus
3 chr12:42474600-42514400 Weak transcription Fetal Muscle Trunk muscle
4 chr12:42474600-42518800 Weak transcription Brain Anterior Caudate brain
5 chr12:42476000-42524400 Weak transcription Gastric stomach
6 chr12:42476200-42524400 Weak transcription Pancreas Pancrea
7 chr12:42476600-42523800 Weak transcription Hela-S3 cervix
8 chr12:42478000-42505000 Weak transcription Lung lung
9 chr12:42478600-42511600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:42479600-42505400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr12:42480200-42505600 Weak transcription Fetal Lung lung
12 chr12:42480200-42512000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr12:42480600-42504600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr12:42483000-42502800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr12:42483600-42511400 Weak transcription Stomach Smooth Muscle stomach
16 chr12:42484200-42504000 Weak transcription Placenta Placenta
17 chr12:42484400-42524800 Weak transcription Right Ventricle heart
18 chr12:42485000-42504000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:42485200-42511600 Weak transcription NHDF-Ad bronchial
20 chr12:42485800-42501400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr12:42485800-42512200 Weak transcription Brain Angular Gyrus brain
22 chr12:42486000-42513000 Weak transcription Aorta Aorta
23 chr12:42488200-42505400 Weak transcription Fetal Muscle Leg muscle
24 chr12:42488400-42504400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:42488400-42504400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr12:42488400-42504800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr12:42488400-42504800 Weak transcription Fetal Intestine Small intestine
28 chr12:42488400-42505000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr12:42488400-42512000 Weak transcription Osteobl bone
30 chr12:42488600-42505000 Weak transcription Fetal Stomach stomach
31 chr12:42488600-42518600 Weak transcription Fetal Brain Male brain
32 chr12:42488800-42511800 Weak transcription HepG2 liver
33 chr12:42490800-42506600 Weak transcription NH-A brain
34 chr12:42490800-42511200 Weak transcription HSMM muscle
35 chr12:42491400-42504800 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr12:42491400-42511200 Weak transcription A549 lung
37 chr12:42492000-42504400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:42492200-42501200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr12:42492200-42501600 Weak transcription Primary B cells from peripheral blood blood
40 chr12:42492200-42505000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr12:42492200-42505000 Weak transcription Ovary ovary
42 chr12:42492200-42505400 Weak transcription Duodenum Mucosa Duodenum
43 chr12:42492200-42511400 Weak transcription Adipose Nuclei Adipose
44 chr12:42492200-42511600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr12:42492200-42512400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr12:42492200-42518600 Weak transcription K562 blood
47 chr12:42492400-42501600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr12:42492400-42502000 Weak transcription Primary hematopoietic stem cells blood
49 chr12:42492400-42504400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr12:42492400-42505400 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015