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Variant report
Variant
rs115198078
Chromosome Location
chr19:45024706-45024707
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:9)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
(count:9 , 50 per page) page:
1
No.
lncRNA name
Chromosome Location
lncRNA alias
1
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
2
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
3
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
4
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
5
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
6
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
7
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
8
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
9
lnc-ZNF180-1
chr19:45024508-45024786
ENSG00000176395
No data
No data
No data
Extended variants information (count: 3 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv1061350
chr19:44869075-45035469
Active TSS ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
18 gene(s)
inside rSNPs
diseases
2
esv3358964
chr19:45023012-45027410
Bivalent/Poised TSS
Chromatin interactive regionlncRNA
2 gene(s)
inside rSNPs
diseases
3
esv3359491
chr19:45023612-45027010
Bivalent/Poised TSS
Chromatin interactive regionlncRNA
2 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
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