Variant report

Variant	rs11520992
Chromosome Location	chr7:104133909-104133910
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10234384	0.83[CHB][hapmap];0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs1034574	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs11772914	0.84[CHB][hapmap];0.82[JPT][hapmap]
rs11972050	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs12333888	0.85[JPT][hapmap]
rs12705219	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs6465992	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs6961457	0.83[CHB][hapmap];0.82[JPT][hapmap]
rs7776632	0.83[CHB][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888925	chr7:104047599-104170560	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links