Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10486524	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1076462	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11525807	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1420149	0.88[EUR][1000 genomes]
rs17394546	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17395534	0.94[ASN][1000 genomes]
rs17395966	0.97[ASN][1000 genomes]
rs4720108	0.85[EUR][1000 genomes]
rs55692505	0.90[EUR][1000 genomes]
rs56836900	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs58069881	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59056279	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60310820	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61007212	0.90[EUR][1000 genomes]
rs6944561	0.85[EUR][1000 genomes]
rs6944964	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6974247	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73095385	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73097268	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7792350	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029220	chr7:32921484-33262190	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
2	nsv830943	chr7:33167106-33352759	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
3	nsv606610	chr7:33218763-33486316	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1016416	chr7:33241443-33559477	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:33217800-33252400	Weak transcription	Aorta	Aorta
2	chr7:33218200-33252200	Weak transcription	Left Ventricle	heart
3	chr7:33230800-33248000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr7:33236400-33247800	Weak transcription	Fetal Heart	heart
5	chr7:33236800-33249200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:33240600-33249800	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr7:33242600-33248000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr7:33247000-33252200	Weak transcription	Ovary	ovary

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