Variant report

Variant rs11534416
Chromosome Location chr9:140246050-140246051
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140234400-140249800 Weak transcription Duodenum Mucosa Duodenum
2 chr9:140234600-140249800 Weak transcription Rectal Smooth Muscle rectum
3 chr9:140237400-140247000 Weak transcription Left Ventricle heart
4 chr9:140238000-140246400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr9:140239200-140288800 Weak transcription Placenta Amnion Placenta Amnion
6 chr9:140239400-140250000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr9:140240600-140268400 Weak transcription Psoas Muscle Psoas
8 chr9:140240800-140247400 Strong transcription Brain Germinal Matrix brain
9 chr9:140241400-140250000 Weak transcription Right Atrium heart
10 chr9:140241600-140249800 Weak transcription Brain Substantia Nigra brain
11 chr9:140242600-140246800 Weak transcription Fetal Muscle Leg muscle
12 chr9:140242800-140249800 Weak transcription Brain Angular Gyrus brain
13 chr9:140242800-140249800 Weak transcription Esophagus oesophagus
14 chr9:140242800-140250000 Weak transcription Liver Liver
15 chr9:140242800-140250000 Weak transcription Pancreas Pancrea
16 chr9:140242800-140250000 Weak transcription Stomach Smooth Muscle stomach
17 chr9:140243000-140249800 Weak transcription Brain Hippocampus Middle brain
18 chr9:140243000-140249800 Weak transcription Fetal Lung lung
19 chr9:140243600-140248600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr9:140243600-140249800 Weak transcription Brain Cingulate Gyrus brain
21 chr9:140243600-140250000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr9:140243800-140246800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr9:140243800-140250000 Weak transcription Colon Smooth Muscle Colon
24 chr9:140244000-140246400 Weak transcription Adipose Nuclei Adipose
25 chr9:140244000-140248000 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr9:140244000-140249000 Weak transcription Fetal Brain Female brain
27 chr9:140244000-140249400 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr9:140244000-140249800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr9:140244000-140249800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr9:140244000-140250000 Weak transcription Brain Anterior Caudate brain
31 chr9:140244000-140250000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr9:140244000-140250000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr9:140244000-140250000 Weak transcription Gastric stomach
34 chr9:140244200-140246200 Weak transcription Right Ventricle heart
35 chr9:140244200-140250000 Weak transcription Colonic Mucosa Colon
36 chr9:140244200-140251200 Weak transcription Aorta Aorta
37 chr9:140244400-140249600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr9:140244800-140249800 Strong transcription Fetal Intestine Small intestine
39 chr9:140245200-140246200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
40 chr9:140245200-140246200 ZNF genes & repeats Fetal Stomach stomach
41 chr9:140245200-140246400 Genic enhancers Lung lung
42 chr9:140245200-140249200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin02 Skin
43 chr9:140245200-140250400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
44 chr9:140245200-140251600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
45 chr9:140245400-140246400 Strong transcription Fetal Muscle Trunk muscle
46 chr9:140245800-140246600 Strong transcription Ovary ovary
47 chr9:140245800-140247000 Strong transcription Breast Myoepithelial Primary Cells Breast
48 chr9:140245800-140249000 Enhancers Skeletal Muscle Male skeletal muscle
49 chr9:140245800-140250400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr9:140246000-140249600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland

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