Variant report

Variant rs11547064
Chromosome Location chr5:179228893-179228894
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179223800-179229600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:179223800-179231600 Weak transcription Fetal Kidney kidney
3 chr5:179223800-179231600 Weak transcription Psoas Muscle Psoas
4 chr5:179224000-179229000 Strong transcription A549 lung
5 chr5:179224000-179229000 Strong transcription NHLF lung
6 chr5:179224000-179229200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr5:179224000-179229200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr5:179224000-179229200 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr5:179224000-179229400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr5:179224000-179229600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr5:179224000-179230000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr5:179224000-179230000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:179224000-179230000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr5:179224000-179230800 Weak transcription Right Atrium heart
15 chr5:179224000-179232200 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr5:179224200-179229000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:179224200-179229000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr5:179224200-179229000 Weak transcription GM12878-XiMat blood
19 chr5:179224200-179229600 Weak transcription NH-A brain
20 chr5:179224200-179230000 Strong transcription Brain Germinal Matrix brain
21 chr5:179224400-179229000 Strong transcription Gastric stomach
22 chr5:179224400-179229000 Weak transcription Hela-S3 cervix
23 chr5:179224400-179229200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr5:179224400-179229200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr5:179224400-179229200 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr5:179224400-179229600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:179225400-179229200 Strong transcription Fetal Intestine Large intestine
28 chr5:179226200-179232200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr5:179226800-179233200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
30 chr5:179227000-179229400 Weak transcription Primary B cells from cord blood blood
31 chr5:179227000-179230800 Weak transcription Fetal Brain Male brain
32 chr5:179227200-179229000 Weak transcription Stomach Mucosa stomach
33 chr5:179227200-179230200 Weak transcription HUVEC blood vessel
34 chr5:179227200-179231000 Weak transcription HSMMtube muscle
35 chr5:179227200-179231800 Weak transcription Brain Substantia Nigra brain
36 chr5:179227400-179229000 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr5:179227400-179229000 Weak transcription NHDF-Ad bronchial
38 chr5:179227400-179230200 Weak transcription Thymus Thymus
39 chr5:179227600-179229200 Weak transcription Brain Angular Gyrus brain
40 chr5:179227600-179230000 Weak transcription Primary T cells from cord blood blood
41 chr5:179227600-179230000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr5:179227600-179230000 Weak transcription HSMM muscle
43 chr5:179227600-179230200 Weak transcription Fetal Lung lung
44 chr5:179227600-179232000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
45 chr5:179227800-179229400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr5:179227800-179232000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:179227800-179232200 Enhancers Fetal Heart heart
48 chr5:179228000-179229600 Genic enhancers Breast Myoepithelial Primary Cells Breast
49 chr5:179228000-179229800 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr5:179228000-179230800 Genic enhancers Primary hematopoietic stem cells short term culture blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links