Variant report

Variant rs11550287
Chromosome Location chr5:42992437-42992438
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:42988400-42996200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr5:42989400-42992600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr5:42990200-42992600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
4 chr5:42990200-42996000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
5 chr5:42990600-42992600 Flanking Active TSS K562 blood
6 chr5:42990800-42992600 Flanking Active TSS Primary hematopoietic stem cells blood
7 chr5:42990800-42993400 Bivalent/Poised TSS Brain Substantia Nigra brain
8 chr5:42990800-42993800 Active TSS Sigmoid Colon Sigmoid Colon
9 chr5:42990800-42996000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
10 chr5:42991000-42995600 Active TSS Right Ventricle heart
11 chr5:42991200-42995400 Active TSS NHLF lung
12 chr5:42991200-42995800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
13 chr5:42991200-42995800 Active TSS Thymus Thymus
14 chr5:42991400-42992600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr5:42991400-42992800 ZNF genes & repeats Lung lung
16 chr5:42991400-42993000 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
17 chr5:42991400-42993200 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
18 chr5:42991400-42994600 Bivalent/Poised TSS Left Ventricle heart
19 chr5:42991400-42995400 Bivalent/Poised TSS Brain Cingulate Gyrus brain
20 chr5:42991400-42995400 Bivalent/Poised TSS Brain Hippocampus Middle brain
21 chr5:42991400-42995600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
22 chr5:42991400-42995800 Active TSS Primary T helper naive cells from peripheral blood blood
23 chr5:42991400-42995800 Bivalent/Poised TSS Duodenum Mucosa Duodenum
24 chr5:42991600-42992600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
25 chr5:42991600-42992600 Bivalent/Poised TSS Psoas Muscle Psoas
26 chr5:42991600-42993200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
27 chr5:42991600-42993200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
28 chr5:42991600-42993400 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
29 chr5:42991600-42993400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
30 chr5:42991600-42993400 Active TSS Spleen Spleen
31 chr5:42991600-42993600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
32 chr5:42991600-42993800 Active TSS Primary T cells from cord blood blood
33 chr5:42991600-42993800 Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr5:42991600-42994800 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
35 chr5:42991600-42995200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
36 chr5:42991600-42995400 Active TSS NHDF-Ad bronchial
37 chr5:42991600-42995600 Active TSS Primary T helper cells PMA-I stimulated --
38 chr5:42991600-42995600 Active TSS Primary T killer naive cells fromperipheralblood blood
39 chr5:42991600-42995600 Active TSS Primary T killer memory cells from peripheral blood blood
40 chr5:42991600-42995800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr5:42991600-42995800 Active TSS HSMMtube muscle
42 chr5:42991800-42992800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
43 chr5:42991800-42992800 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
44 chr5:42991800-42993200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr5:42991800-42993200 Active TSS Primary T cells fromperipheralblood blood
46 chr5:42991800-42993200 Active TSS Primary Natural Killer cells fromperipheralblood blood
47 chr5:42991800-42993200 Flanking Bivalent TSS/Enh Fetal Stomach stomach
48 chr5:42991800-42993400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:42991800-42993600 Active TSS HepG2 liver
50 chr5:42991800-42993800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived

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