Variant report

Variant	rs1155311
Chromosome Location	chr11:83489415-83489416
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1155312	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12283621	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1451391	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1451392	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs715858	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7937829	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83485800-83490600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr11:83486000-83489600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr11:83486200-83489600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr11:83488000-83490400	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr11:83488000-83491000	Weak transcription	Brain Cingulate Gyrus	brain
6	chr11:83488000-83491200	Weak transcription	Brain Substantia Nigra	brain
7	chr11:83488200-83491000	Weak transcription	Brain Angular Gyrus	brain
8	chr11:83489200-83489600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr11:83489200-83490800	Enhancers	NHEK	skin
10	chr11:83489400-83489600	Enhancers	Brain Hippocampus Middle	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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