Variant report

Variant rs11554666
Chromosome Location chr21:47552624-47552625
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47530800-47563600 Weak transcription Right Atrium heart
2 chr21:47535000-47554800 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr21:47535200-47552800 Strong transcription Fetal Muscle Leg muscle
4 chr21:47538200-47563600 Weak transcription Brain Anterior Caudate brain
5 chr21:47543600-47553800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr21:47544000-47553400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
7 chr21:47544200-47553800 Strong transcription Osteobl bone
8 chr21:47545000-47556200 Weak transcription HSMMtube muscle
9 chr21:47546200-47556200 Weak transcription Fetal Lung lung
10 chr21:47547600-47558400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr21:47547800-47555000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr21:47548000-47557200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr21:47548000-47563600 Weak transcription Gastric stomach
14 chr21:47548200-47555000 Weak transcription H9 Cell Line embryonic stem cell
15 chr21:47548200-47557600 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr21:47548800-47553400 Strong transcription Fetal Stomach stomach
17 chr21:47549200-47553000 Weak transcription NH-A brain
18 chr21:47549200-47556800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr21:47549400-47553000 Weak transcription Colonic Mucosa Colon
20 chr21:47549400-47557000 Weak transcription H1 Cell Line embryonic stem cell
21 chr21:47549400-47557800 Weak transcription Aorta Aorta
22 chr21:47549600-47552800 Weak transcription Colon Smooth Muscle Colon
23 chr21:47549600-47553000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr21:47549600-47553800 Weak transcription Adipose Nuclei Adipose
25 chr21:47549600-47555200 Weak transcription Left Ventricle heart
26 chr21:47549800-47563600 Weak transcription Brain Inferior Temporal Lobe brain
27 chr21:47550000-47556400 Weak transcription Right Ventricle heart
28 chr21:47550200-47553600 Weak transcription Muscle Satellite Cultured Cells --
29 chr21:47550600-47554000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr21:47550800-47556000 Weak transcription Fetal Heart heart
31 chr21:47551000-47552800 Weak transcription Fetal Intestine Small intestine
32 chr21:47551000-47563600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr21:47551200-47554800 Weak transcription Fetal Muscle Trunk muscle
34 chr21:47551200-47557000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr21:47551200-47564000 Weak transcription Spleen Spleen
36 chr21:47551400-47553000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
37 chr21:47551400-47554200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
38 chr21:47552000-47553000 ZNF genes & repeats NHLF lung
39 chr21:47552000-47553200 Strong transcription Stomach Smooth Muscle stomach
40 chr21:47552000-47553400 Strong transcription Ovary ovary
41 chr21:47552400-47552800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr21:47552400-47556000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr21:47552400-47556000 Weak transcription Liver Liver
44 chr21:47552400-47556400 Weak transcription NHDF-Ad bronchial
45 chr21:47552400-47557600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr21:47552400-47563400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr21:47552600-47554800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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