Variant report

Variant rs11555927
Chromosome Location chrX:54841737-54841738
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:54835200-54843800 Weak transcription Small Intestine intestine
2 chrX:54835800-54850600 Weak transcription Right Atrium heart
3 chrX:54836000-54844000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chrX:54836000-54847400 Weak transcription Psoas Muscle Psoas
5 chrX:54836200-54842200 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chrX:54836200-54843000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chrX:54836200-54843200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
8 chrX:54836200-54843200 Strong transcription Fetal Thymus thymus
9 chrX:54836200-54850800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chrX:54836400-54841800 Strong transcription Colon Smooth Muscle Colon
11 chrX:54836400-54842200 Strong transcription Aorta Aorta
12 chrX:54836400-54842600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
13 chrX:54836400-54842800 Strong transcription H1 Cell Line embryonic stem cell
14 chrX:54836400-54843200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chrX:54836400-54843200 Strong transcription iPS-20b Cell Line embryonic stem cell
16 chrX:54836400-54843200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chrX:54836400-54843200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chrX:54836400-54843200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chrX:54836400-54844000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chrX:54836600-54841800 Strong transcription HUES6 Cell Line embryonic stem cell
21 chrX:54836600-54842000 Strong transcription Brain Substantia Nigra brain
22 chrX:54836600-54842200 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chrX:54836600-54842200 Strong transcription Primary T helper naive cells fromperipheralblood blood
24 chrX:54836600-54842200 Strong transcription Cortex derived primary cultured neurospheres brain
25 chrX:54836600-54842200 Strong transcription Fetal Intestine Small intestine
26 chrX:54836600-54842400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chrX:54836600-54842600 Strong transcription Brain Inferior Temporal Lobe brain
28 chrX:54836600-54842800 Strong transcription HUES64 Cell Line embryonic stem cell
29 chrX:54836600-54842800 Strong transcription Left Ventricle heart
30 chrX:54836600-54842800 Strong transcription Right Ventricle heart
31 chrX:54836600-54843000 Strong transcription Primary B cells from peripheral blood blood
32 chrX:54836600-54843000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chrX:54836600-54843200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chrX:54836600-54843200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chrX:54836600-54843200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
36 chrX:54836600-54843200 Strong transcription Fetal Lung lung
37 chrX:54836600-54843200 Strong transcription Spleen Spleen
38 chrX:54836600-54843400 Strong transcription Fetal Intestine Large intestine
39 chrX:54836800-54842200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chrX:54836800-54842400 Strong transcription Thymus Thymus
41 chrX:54836800-54842600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chrX:54836800-54842600 Strong transcription Adipose Nuclei Adipose
43 chrX:54836800-54842600 Strong transcription Rectal Smooth Muscle rectum
44 chrX:54836800-54843000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chrX:54836800-54843200 Strong transcription Ovary ovary
46 chrX:54836800-54843200 Strong transcription Rectal Mucosa Donor 29 rectum
47 chrX:54836800-54843200 Strong transcription HSMMtube muscle
48 chrX:54837000-54842200 Strong transcription Sigmoid Colon Sigmoid Colon
49 chrX:54837000-54842600 Strong transcription Brain Cingulate Gyrus brain
50 chrX:54837000-54842800 Strong transcription Liver Liver

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