Variant report

Variant	rs2005463
Chromosome Location	chrX:54976385-54976386
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:54974906..54977015-chrX:54979157..54981626,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1043031	0.84[CEU][hapmap];0.83[MEX][hapmap];0.94[TSI][hapmap]
rs1043034	0.84[CEU][hapmap];0.94[TSI][hapmap]
rs1043044	0.83[CEU][hapmap];0.94[TSI][hapmap]
rs11555927	0.86[MKK][hapmap]
rs12014660	1.00[CEU][hapmap];0.93[JPT][hapmap];0.97[TSI][hapmap]
rs12851962	1.00[ASW][hapmap];0.89[CEU][hapmap];0.88[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.93[JPT][hapmap];1.00[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap]
rs12858090	0.83[CEU][hapmap]
rs12858147	0.84[CEU][hapmap]
rs2071932	0.84[CEU][hapmap];0.94[TSI][hapmap]
rs2071933	0.84[CEU][hapmap];0.94[TSI][hapmap]
rs2071934	0.84[CEU][hapmap]
rs2273138	0.89[CEU][hapmap];0.92[GIH][hapmap];0.94[TSI][hapmap]
rs2281383	1.00[ASW][hapmap];0.89[CEU][hapmap];0.88[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.93[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap]
rs2361189	0.84[CEU][hapmap]
rs3765479	0.89[CEU][hapmap];0.92[GIH][hapmap];0.94[TSI][hapmap]
rs4826364	1.00[CEU][hapmap];0.96[GIH][hapmap];0.87[JPT][hapmap];0.83[MEX][hapmap];0.97[TSI][hapmap]
rs4826365	1.00[CEU][hapmap];0.96[GIH][hapmap];0.93[JPT][hapmap];0.83[MEX][hapmap];0.97[TSI][hapmap]
rs5914241	0.89[CEU][hapmap];0.88[GIH][hapmap];0.94[TSI][hapmap]
rs5960055	0.89[CEU][hapmap];0.92[GIH][hapmap];0.94[TSI][hapmap]
rs5960060	1.00[MKK][hapmap]
rs5960336	0.84[CEU][hapmap]
rs5960385	1.00[MKK][hapmap]
rs6611391	0.89[CEU][hapmap];0.80[JPT][hapmap]
rs743974	0.84[CEU][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap]
rs763183	0.84[CEU][hapmap];0.94[TSI][hapmap]
rs763184	0.84[CEU][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:54963000-54977000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chrX:54964400-54976800	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chrX:54971600-54978200	Weak transcription	Adipose Nuclei	Adipose
4	chrX:54975600-54976400	Strong transcription	Liver	Liver

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