Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:54833808..54836598-chrX:54849756..54852205,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000102316	Chromatin interaction

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1043031	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap]
rs1043034	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap]
rs1043044	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12014660	0.85[CEU][hapmap];0.80[CHB][hapmap];0.80[JPT][hapmap]
rs12832165	0.81[CEU][hapmap]
rs12851962	0.94[CEU][hapmap];0.80[JPT][hapmap]
rs12858090	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2005463	0.84[CEU][hapmap]
rs2071932	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2071933	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2071934	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2273138	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2281383	0.94[CEU][hapmap];0.80[JPT][hapmap]
rs2361189	1.00[CEU][hapmap]
rs3765479	0.94[CEU][hapmap];0.87[CHB][hapmap]
rs4826364	0.84[CEU][hapmap];0.87[CHB][hapmap]
rs4826365	0.84[CEU][hapmap];0.81[CHB][hapmap];0.80[JPT][hapmap]
rs5914241	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5960055	0.94[CEU][hapmap];0.87[CHB][hapmap]
rs5960336	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6611391	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs743974	1.00[CEU][hapmap];0.93[CHB][hapmap];0.80[JPT][hapmap]
rs763183	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs763184	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:54842600-54852000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chrX:54843200-54852600	Weak transcription	HSMMtube	muscle
3	chrX:54850000-54851400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
4	chrX:54850200-54851000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chrX:54850400-54851000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chrX:54850400-54851400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chrX:54850600-54851000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chrX:54850600-54851000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chrX:54850600-54851000	Bivalent Enhancer	Fetal Stomach	stomach
10	chrX:54850600-54851200	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chrX:54850600-54851600	Enhancers	Fetal Muscle Leg	muscle
12	chrX:54850800-54851000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chrX:54850800-54851000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chrX:54850800-54851000	Enhancers	Left Ventricle	heart
15	chrX:54850800-54851000	Enhancers	Psoas Muscle	Psoas

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