The 2.0 version of rSNPBase

Variant report

Variant rs11574858
Chromosome Location chr11:94279785-94279786
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94276400-94280000 Active TSS ES-WA7 Cell Line embryonic stem cell
2 chr11:94276600-94281000 Active TSS Aorta Aorta
3 chr11:94276800-94279800 Active TSS Brain Cingulate Gyrus brain
4 chr11:94276800-94280000 Active TSS Fetal Kidney kidney
5 chr11:94276800-94280200 Active TSS Gastric stomach
6 chr11:94276800-94280200 Active TSS Rectal Smooth Muscle rectum
7 chr11:94276800-94282600 Active TSS Fetal Intestine Large intestine
8 chr11:94277000-94280000 Active TSS Rectal Mucosa Donor 31 rectum
9 chr11:94277000-94281000 Active TSS Stomach Mucosa stomach
10 chr11:94277000-94283400 Active TSS GM12878-XiMat blood
11 chr11:94277600-94280000 Flanking Active TSS Primary hematopoietic stem cells blood
12 chr11:94278000-94280200 Flanking Active TSS Adipose Nuclei Adipose
13 chr11:94278000-94280600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr11:94278200-94279800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
15 chr11:94278200-94280400 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr11:94278200-94280400 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr11:94278200-94280600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr11:94278200-94281000 Flanking Active TSS Primary monocytes fromperipheralblood blood
19 chr11:94278200-94281000 Transcr. at gene 5' and 3' Dnd41 blood
20 chr11:94278200-94281200 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr11:94278400-94280200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr11:94278400-94280400 Enhancers HMEC breast
23 chr11:94278400-94280600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr11:94278400-94280800 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr11:94278400-94280800 Enhancers Fetal Heart heart
26 chr11:94278400-94283400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr11:94278600-94279800 Weak transcription Brain Angular Gyrus brain
28 chr11:94278600-94280400 Enhancers Primary T cells fromperipheralblood blood
29 chr11:94278600-94280400 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
30 chr11:94278600-94280600 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr11:94278600-94280600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr11:94278600-94281000 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr11:94278600-94281000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
34 chr11:94278600-94282400 Enhancers Primary T helper cells PMA-I stimulated --
35 chr11:94278600-94282400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:94278800-94279800 Flanking Active TSS Osteobl bone
37 chr11:94278800-94280000 Active TSS Pancreas Pancrea
38 chr11:94278800-94280200 Enhancers Liver Liver
39 chr11:94278800-94280400 Enhancers Spleen Spleen
40 chr11:94278800-94280600 Active TSS Colonic Mucosa Colon
41 chr11:94278800-94281000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
42 chr11:94278800-94281000 Enhancers Primary T helper naive cells from peripheral blood blood
43 chr11:94279000-94279800 Active TSS Duodenum Mucosa Duodenum
44 chr11:94279000-94279800 Enhancers Lung lung
45 chr11:94279000-94280200 Active TSS A549 lung
46 chr11:94279000-94280400 Enhancers Esophagus oesophagus
47 chr11:94279000-94280400 Enhancers Left Ventricle heart
48 chr11:94279000-94280800 Enhancers Skeletal Muscle Male skeletal muscle
49 chr11:94279000-94281000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr11:94279000-94281400 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015