Variant report

Variant	rs1158613
Chromosome Location	chr7:14109411-14109412
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11768508	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17167791	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17167826	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62452792	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62452794	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62452795	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62452797	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62452798	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62452801	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62452805	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62452829	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62452831	0.87[EUR][1000 genomes]
rs73059926	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73059973	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019873	chr7:13707148-14133367	Bivalent Enhancer Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv949467	chr7:13938464-14279074	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv1015312	chr7:14092753-14266917	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv981434	chr7:14105236-14110821	Weak transcription Enhancers	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14106400-14110000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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