Variant report

Variant	rs11586237
Chromosome Location	chr1:67691766-67691767
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10889675	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11581483	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11586253	0.96[ASN][1000 genomes]
rs12406837	0.94[ASN][1000 genomes]
rs4655531	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56669261	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56996373	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59033475	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72929019	0.88[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67689800-67692400	Enhancers	Brain Germinal Matrix	brain
2	chr1:67690600-67692800	Strong transcription	K562	blood
3	chr1:67691000-67691800	Enhancers	Fetal Kidney	kidney
4	chr1:67691000-67693200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr1:67691200-67692600	Enhancers	Esophagus	oesophagus
6	chr1:67691200-67692800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links