Variant report

Variant	rs11593034
Chromosome Location	chr10:23303983-23303984
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11013202	1.00[CEU][hapmap]
rs11013254	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11013267	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11013268	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11511184	1.00[CEU][hapmap]
rs12356890	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17538592	1.00[CEU][hapmap]
rs7097036	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7898656	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975810	chr10:23302287-23306366	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23301400-23311200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr10:23303200-23304000	Enhancers	GM12878-XiMat	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links