Variant report

Variant	rs1160091
Chromosome Location	chr4:46949593-46949594
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10004131	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10017677	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10021918	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10025379	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10028342	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10033500	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11733919	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12649623	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13126445	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13128102	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13138566	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13140528	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1398169	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1398170	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1512136	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1512138	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17598809	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17599074	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17599102	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17599158	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17641386	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1849280	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2055942	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2055943	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2351170	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35989353	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs67128139	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67592528	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6818817	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7678338	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7691100	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9291294	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9291295	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9291296	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9291297	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9992220	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46946000-46950600	Enhancers	Fetal Heart	heart
2	chr4:46947400-46949800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr4:46947400-46952200	Weak transcription	Right Ventricle	heart
4	chr4:46947600-46952200	Weak transcription	Left Ventricle	heart
5	chr4:46947800-46950000	Enhancers	Brain Germinal Matrix	brain
6	chr4:46948000-46950200	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr4:46948000-46950400	Enhancers	Fetal Brain Male	brain
8	chr4:46948200-46950000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr4:46948400-46949800	Enhancers	Brain Anterior Caudate	brain
10	chr4:46948400-46950000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr4:46948800-46949800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr4:46948800-46955200	Weak transcription	Brain Cingulate Gyrus	brain
13	chr4:46949000-46949600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr4:46949000-46949600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr4:46949000-46949800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr4:46949000-46949800	Enhancers	HUVEC	blood vessel
17	chr4:46949200-46949600	Enhancers	Hela-S3	cervix
18	chr4:46949200-46949800	Enhancers	Osteobl	bone
19	chr4:46949400-46949600	Flanking Active TSS	Aorta	Aorta
20	chr4:46949400-46949600	Enhancers	Placenta	Placenta
21	chr4:46949400-46950200	Enhancers	Fetal Brain Female	brain

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